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Problems in loading data

Open imj835 opened this issue 5 years ago • 0 comments

Hello, I am getting the following error messages when I try to load my data set:

Error in read.table(file = file, header = header, sep = sep, quote = quote, : duplicate 'row.names' are not allowed

and;

Error in plot.window(...) : need finite 'xlim' values In addition: Warning messages: 1: In min(x) : no non-missing arguments to min; returning Inf 2: In max(x) : no non-missing arguments to max; returning -Inf 3: In min(x) : no non-missing arguments to min; returning Inf 4: In max(x) : no non-missing arguments to max; returning -Inf

I have attached an exert of the data set so that you can see the format. Can you let me know the correct format? Also when I run Biscuit do I need to put these conditions or is it optional?

is_format_genes_cells <- FALSE

choose_cells <- 300 choose_genes <- 150 gene_batch <- 50; num_iter <- 20; z_true_labels_avl <- TRUE num_cells_batch <- 100; alpha <- 1; Thank you!

Insiya final_matrix.txt

imj835 avatar Jul 10 '19 15:07 imj835