hts-specs
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INFO CIPOS Number=2xA
In VCFv4.5, the number of CIPOS entries should be two times the number of ALT alleles. However, its Number
is defined to be .
. This makes it hard to figure out how to parse such meta-information lines automatically.
How about 2xA
to indicate two times the number of ALT alleles?
In the same way, we can do
##INFO=<ID=MEINFO,Number=4xA,Type=String,Description="Mobile element info of the form NAME,START,END,POLARITY"> ##INFO=<ID=METRANS,Number=4xA,Type=String,Description="Mobile element transduction info of the form CHR,START,END,POLARITY">
We can use number
xcharacter/number
format to write the following as well.
##INFO=<ID=xxxx,Number=2xR,Type=...> ##INFO=<ID=xxxx,Number=4xG,Type=...>