Fan

more singular values/vectors requested than available

1

Dear Developer, I wanna ask about an error occurred when I run the fastMNN > out

ViewInterCircos

6

Dear, I would like to ask one question,when I perform the circos plot, I got error like that  Thanks in advance for helping me out.

executor > local (4) executor > local (5) executor > local (5) [bc/96dcc6] process > IMCTOOLS (20191121_BRAC3438.6f) [100%] 1 of 1 ✔ executor > local (6) [bc/96dcc6] process > IMCTOOLS...

how to export the particular data file about the distance calculation

1

Dear, It was a great package! I just want to know how to export the particular distance data like this, sm.pl.spatial_distance (adata, method='numeric', distance_from='Macrophages',imageid='imageid',phenotype='CellType') Thanks and look forward to your...

How can I get the test p value of two groups when comparing the distances between two cell types

1

Certainly! Here's a revised version of your email: Dear Developer, I've been using the sm.pl.spatial_distance function and it's been working seamlessly for comparing distances within groups: sm.pl.spatial_distance(adata, method='distribution', distance_from='CD8T', distance_to='APCs',...

can this ens2sym.so function work?

2

Dear developer, I am just wondering about the function ens2sym? How to use this to convert the ens to gene symbol for seurat? I tried it but nothing changed. Thanks...