funr
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sahilseth
Simple Utility providing Shell Access to all R Functions
`bug1.R`: ```r x -> normalizePath -> path.expand Execution halted ```
``` [root@650ee0cf2924 tmp]# flowr -v ultraseq::merge_sheets x=tumor___normal_1.mutect.txt .filter='judgement=='KEEP'' outfile=tmp.tsv args: -vultraseq::merge_sheetsx=tumor___normal_1.mutect.txt.filter=judgement==KEEPoutfile=tmp.tsv script_args: -v using func: ultraseq::merge_sheets with final args: x=tumor___normal_1.mutect.txt.filter=judgement==KEEPoutfile=tmp.tsv loading pkg: ultraseq Loading required package: assertthat ultraseq: genomic flows...
For example, funr calls a function, which fails. In this case the only relevant error is of that function. ``` flowr run try: flowr -h run to get more details...