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Empty plots in HTML report

Open soungalo opened this issue 6 years ago • 0 comments

Hello,
I ran FastQC (v0.11.8) on PacBio CLR data like this: fastqc -f bam lima.bc1087--bc1087_subsample.bam -t 10 The analysis completed successfully, but the resulting HTML report has the "Per base sequence quality" and the "Per sequence quality scores" plots empty of any data: report I suspect that this has to do with the large range of read lengths in the data because a result of similar size with smaller range (CCS) appears normal.
Please find attached the zip file. lima.bc1087--bc1087_subsample_fastqc.zip

soungalo avatar Jan 10 '20 13:01 soungalo