Ryan Williams comments

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                                            Ryan Williams

--loci argument conflicts with TakeLociIterator

Good catch, working on a fix

Move to Spark 2.0

I haven't paid much attention to their 2.0.0-upgrade efforts yet, so I don't have a good sense of what that will entail.

Get guacamole and friends building on newest batch of shared libraries

started an avalanche of releases last night that this is a leaf of, should have it wrapped up in the next few hours

+1'ing this, was just interested in browsing the 12GB (uncompressed) 1KG phase 3 VCF found here: ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/release/20130502/ALL.wgs.phase3_shapeit2_mvncall_integrated_v5b.20130502.sites.vcf.gz.

Show/hide columns

I made some toggle-columns functionality in Spree if that is of interest: ![](http://f.cl.ly/items/0Z3c3w3U3K0L2C09311V/Screen%20Recording%202015-10-15%20at%2007.49%20PM.gif) I have a whole `` react component in there with columns that can render themselves in jsx...

Decide on Run vs. VCF & rename

I like "Add Variants" + "Add Reads"!

Enable "parallax" track scrolling

+1, here's an example: ![](https://s3.amazonaws.com/f.cl.ly/items/2g1l3P0L1v3n1k2F0n0n/Screen%20Recording%202015-07-02%20at%2012.37%20PM.gif)

Render insertions as gaps in the reference

Yea I would really like this. And a hotkey :)

Render insertions as gaps in the reference

sorry, not sure what I'm looking at in this screenshot On Fri, Sep 18, 2015 at 2:40 PM Dan Vanderkam [email protected] wrote: > BioDalliance has a mode kinda like this....

Render insertions as gaps in the reference

Cool, that definitely seems better than nothing…