pytorch_sparse segmentation fault (core dumped) when import torch

segmentation fault (core dumped) when import torch_sparse

Open daeunni opened this issue 2 years ago • 1 comments

Hi, i occured segmentation fault(core dumped) error when import torch_sparse. Why this error occured?

My version is ..

torch : 1.9.0+cu111
cuda : 11.4

I installed torch-sparse using this pip install torch-scatter torch-sparse -f https://data.pyg.org/whl/torch-1.9.0+cu111.html

Apr 30 '22 10:04 daeunni

Can you show me the installation log when running

pip uninstall torch-scatter torch-sparse
pip install torch-scatter torch-sparse -f https://data.pyg.org/whl/torch-1.9.0+cu111.html

Does the same error happen when importing torch_scatter? Does a manual installation of the packages work?

pip uninstall torch-scatter torch-sparse
pip install torch-scatter torch-sparse

May 02 '22 06:05 rusty1s

This issue had no activity for 6 months. It will be closed in 2 weeks unless there is some new activity. Is this issue already resolved?

Oct 30 '22 02:10 github-actions[bot]

Hi, I have a similar problem. After I update my libraries, I start to get "(interrupted by signal 11: SIGSEGV)" when I import "from torch_scatter import scatter_sum". I uninstall/reinstall but nothing is changed. The installed version of other libraries that might be related: numpy==1.23.5 scipy==1.8.1 torch==1.13.0 torch-cluster==1.6.0 torch-geometric==2.2.0 torch-scatter==2.1.0 torch-sparse==0.6.15 torch-spline-conv==1.2.1 torchvision==0.14.0 tensorflow==2.11.0 tensorflow-estimator==2.11.0 tensorflow-io-gcs-filesystem==0.28.0 tensorflow-probability==0.19.0

Dec 20 '22 23:12 TurgayPamuklu

Can you share your installation log of torch-scatter with me?

Dec 22 '22 08:12 rusty1s

Hi rusty1s, you can find the logs below. My OS is a virtual Ubuntu 22.04.1 LTS under Hyper-V. Recently, I updated all the packages in my virtual environment. First, I will remove the libraries that I do not use anymore such as protobuf. These libraries might cause a conflict in case your library is compatible with the recent numpy/torch/tensorflow libraries. It would have been great if there was a static code checker for python projects that shows which libraries are not used anymore. Wish a great new year.

2022-12-28T10:25:21,214 Using pip 22.3.1 from /home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/pip (python 3.10)
2022-12-28T10:25:21,214 Non-user install because user site-packages disabled
2022-12-28T10:25:21,310 Created temporary directory: /tmp/pip-build-tracker-gmiksno8
2022-12-28T10:25:21,310 Initialized build tracking at /tmp/pip-build-tracker-gmiksno8
2022-12-28T10:25:21,310 Created build tracker: /tmp/pip-build-tracker-gmiksno8
2022-12-28T10:25:21,310 Entered build tracker: /tmp/pip-build-tracker-gmiksno8
2022-12-28T10:25:21,311 Created temporary directory: /tmp/pip-install-jk68wc1w
2022-12-28T10:25:21,311 Created temporary directory: /tmp/pip-ephem-wheel-cache-vuu4bfw2
2022-12-28T10:25:21,321 1 location(s) to search for versions of torch-scatter:
2022-12-28T10:25:21,321 * https://pypi.org/simple/torch-scatter/
2022-12-28T10:25:21,321 Fetching project page and analyzing links: https://pypi.org/simple/torch-scatter/
2022-12-28T10:25:21,321 Getting page https://pypi.org/simple/torch-scatter/
2022-12-28T10:25:21,321 Found index url https://pypi.org/simple
2022-12-28T10:25:21,391 Fetched page https://pypi.org/simple/torch-scatter/ as application/vnd.pypi.simple.v1+json
2022-12-28T10:25:21,392   Found link https://files.pythonhosted.org/packages/29/96/566ac314e796d4b07209a3b88cc7a8d2e8582d55819e33f72e6c0e8d8216/torch_scatter-0.3.0.tar.gz (from https://pypi.org/simple/torch-scatter/), version: 0.3.0
2022-12-28T10:25:21,392   Found link https://files.pythonhosted.org/packages/6a/b0/ecffacddf573c147c70c6e43ce05d24f007155ce3fb436959d3d2a24da46/torch_scatter-1.0.2.tar.gz (from https://pypi.org/simple/torch-scatter/), version: 1.0.2
2022-12-28T10:25:21,392   Found link https://files.pythonhosted.org/packages/08/09/07b106f3e74246f4ecf6517013a053b6dd7486c4f889d81f39adc662431f/torch_scatter-1.0.3.tar.gz (from https://pypi.org/simple/torch-scatter/), version: 1.0.3
2022-12-28T10:25:21,392   Found link https://files.pythonhosted.org/packages/2d/70/df2bc259d9606f00854ca43b6839f9047ec44900563435e0067584c93864/torch_scatter-1.0.4.tar.gz (from https://pypi.org/simple/torch-scatter/), version: 1.0.4
2022-12-28T10:25:21,392   Found link https://files.pythonhosted.org/packages/2f/97/c50a6aeaedc6924180c6f5810d2a7405ce11aa9b82ba4284badad549d665/torch_scatter-1.1.0.tar.gz (from https://pypi.org/simple/torch-scatter/), version: 1.1.0
2022-12-28T10:25:21,392   Found link https://files.pythonhosted.org/packages/91/5f/eb1d3ef3810cb1165859d40db4d9ee6d7f1dfef97d7e5c34010055f43d95/torch_scatter-1.1.1.tar.gz (from https://pypi.org/simple/torch-scatter/), version: 1.1.1
2022-12-28T10:25:21,392   Found link https://files.pythonhosted.org/packages/d4/83/67eeea00c2db1959e2ff95d8680dbd756977bfab254bda8658f09dc3bc11/torch_scatter-1.1.2.tar.gz (from https://pypi.org/simple/torch-scatter/), version: 1.1.2
2022-12-28T10:25:21,392   Found link https://files.pythonhosted.org/packages/07/c0/f7ac424496f4a3bcb31aa993fba29077a6d42fc2624c66e90b58a566a98e/torch_scatter-1.2.0.tar.gz (from https://pypi.org/simple/torch-scatter/), version: 1.2.0
2022-12-28T10:25:21,392   Found link https://files.pythonhosted.org/packages/24/b7/680c3b392a4b55a0ebfb480aabb0d5c188e94bb21790104175c8cd614947/torch_scatter-1.3.0.tar.gz (from https://pypi.org/simple/torch-scatter/), version: 1.3.0
2022-12-28T10:25:21,392   Found link https://files.pythonhosted.org/packages/35/d4/750403a8aa32cdb3d2d05849c6a10e4e0604de5e0cc94b81a0d0d69a75f3/torch_scatter-1.3.1.tar.gz (from https://pypi.org/simple/torch-scatter/), version: 1.3.1
2022-12-28T10:25:21,393   Found link https://files.pythonhosted.org/packages/30/d9/1d5fd4d183dabd9e0a1f7008ecf83318432359f4cc27480e3f2212f44d9c/torch_scatter-1.3.2.tar.gz (from https://pypi.org/simple/torch-scatter/), version: 1.3.2
2022-12-28T10:25:21,393   Found link https://files.pythonhosted.org/packages/b8/c3/8bad887ffa55c86f120ef5ae252dc0e357b3bd956d9fbf45242bacc46290/torch_scatter-1.4.0.tar.gz (from https://pypi.org/simple/torch-scatter/), version: 1.4.0
2022-12-28T10:25:21,393   Found link https://files.pythonhosted.org/packages/28/f7/fa4e61587169924203a32416f7835939fdd79994eaa429b4f8ef8f0e07e2/torch_scatter-2.0.2.tar.gz (from https://pypi.org/simple/torch-scatter/), version: 2.0.2
2022-12-28T10:25:21,393   Found link https://files.pythonhosted.org/packages/36/2a/ef3d841ec577e2231662ef86af983c6c7c7d509a0e1d9f12949d0218b492/torch_scatter-2.0.3.tar.gz (from https://pypi.org/simple/torch-scatter/) (requires-python:>=3.6), version: 2.0.3
2022-12-28T10:25:21,393   Found link https://files.pythonhosted.org/packages/98/a9/47cd92673b6ba251240d587815c763baac2099b07bb76fecdb3b7ae5cece/torch_scatter-2.0.4.tar.gz (from https://pypi.org/simple/torch-scatter/) (requires-python:>=3.6), version: 2.0.4
2022-12-28T10:25:21,393   Found link https://files.pythonhosted.org/packages/01/45/cd93ed3227248773ba8bc4b3beaa04e8bddb127a793a41bad875369951b3/torch_scatter-2.0.5.tar.gz (from https://pypi.org/simple/torch-scatter/) (requires-python:>=3.6), version: 2.0.5
2022-12-28T10:25:21,393   Found link https://files.pythonhosted.org/packages/91/26/f2f0767a0e72c38d5d17f53117deb8aaafaf58f4ad658cee56cd5158c979/torch_scatter-2.0.6.tar.gz (from https://pypi.org/simple/torch-scatter/) (requires-python:>=3.6), version: 2.0.6
2022-12-28T10:25:21,393   Found link https://files.pythonhosted.org/packages/fa/d1/0bade0c3b9222710528de0458ad48407dab46efd7ad3d4fd1be82b68ac2b/torch_scatter-2.0.7.tar.gz (from https://pypi.org/simple/torch-scatter/) (requires-python:>=3.6), version: 2.0.7
2022-12-28T10:25:21,394   Found link https://files.pythonhosted.org/packages/a9/f0/cc0249cc963e50ea6d00f06a1930f84beebe37cf5ca83fbb50169d7e715a/torch_scatter-2.0.8.tar.gz (from https://pypi.org/simple/torch-scatter/) (requires-python:>=3.6), version: 2.0.8
2022-12-28T10:25:21,394   Found link https://files.pythonhosted.org/packages/1b/a0/6e44e887eb7fff78a9642035fe9662fc22c850a377369a52f308dd553104/torch_scatter-2.0.9.tar.gz (from https://pypi.org/simple/torch-scatter/) (requires-python:>=3.6), version: 2.0.9
2022-12-28T10:25:21,394   Found link https://files.pythonhosted.org/packages/49/f6/2407e1618ec03952a5fe7ebd6e6f7598ede1201ae8b12a96f85f8a03e81e/torch_scatter-2.1.0.tar.gz (from https://pypi.org/simple/torch-scatter/) (requires-python:>=3.7), version: 2.1.0
2022-12-28T10:25:21,394 Skipping link: not a file: https://pypi.org/simple/torch-scatter/
2022-12-28T10:25:21,399 Given no hashes to check 21 links for project 'torch-scatter': discarding no candidates
2022-12-28T10:25:21,405 Using cached wheel link: file:///home/pamuklu/.cache/pip/wheels/54/29/af/cc2f5a40b96cb99ac8e6eed2a9275579b2ecaebddac8fc0bde/torch_scatter-2.1.0-cp310-cp310-linux_x86_64.whl
2022-12-28T10:25:21,405 Collecting torch-scatter
2022-12-28T10:25:21,405   Using cached torch_scatter-2.1.0-cp310-cp310-linux_x86_64.whl
2022-12-28T10:25:21,409   Added torch-scatter from file:///home/pamuklu/.cache/pip/wheels/54/29/af/cc2f5a40b96cb99ac8e6eed2a9275579b2ecaebddac8fc0bde/torch_scatter-2.1.0-cp310-cp310-linux_x86_64.whl to build tracker '/tmp/pip-build-tracker-gmiksno8'
2022-12-28T10:25:21,409   Removed torch-scatter from file:///home/pamuklu/.cache/pip/wheels/54/29/af/cc2f5a40b96cb99ac8e6eed2a9275579b2ecaebddac8fc0bde/torch_scatter-2.1.0-cp310-cp310-linux_x86_64.whl from build tracker '/tmp/pip-build-tracker-gmiksno8'
2022-12-28T10:25:21,411 1 location(s) to search for versions of torch-sparse:
2022-12-28T10:25:21,411 * https://pypi.org/simple/torch-sparse/
2022-12-28T10:25:21,411 Fetching project page and analyzing links: https://pypi.org/simple/torch-sparse/
2022-12-28T10:25:21,412 Getting page https://pypi.org/simple/torch-sparse/
2022-12-28T10:25:21,412 Found index url https://pypi.org/simple
2022-12-28T10:25:21,449 Fetched page https://pypi.org/simple/torch-sparse/ as application/vnd.pypi.simple.v1+json
2022-12-28T10:25:21,450   Found link https://files.pythonhosted.org/packages/21/a6/af5865f7bc2dc45ea789ebb35bdf5d84c05e140d7d2ec7e5823d24db176f/torch_sparse-0.1.0.tar.gz (from https://pypi.org/simple/torch-sparse/), version: 0.1.0
2022-12-28T10:25:21,450   Found link https://files.pythonhosted.org/packages/02/4f/89bcb156022a3960c4db852915c64ea78b4e993e0f8d7a83e60e6819fc11/torch_sparse-0.2.0.tar.gz (from https://pypi.org/simple/torch-sparse/), version: 0.2.0
2022-12-28T10:25:21,450   Found link https://files.pythonhosted.org/packages/8f/41/98db80cc9d9345c76445393661ce4dd3e08fc46fb17028e7706612063e4d/torch_sparse-0.2.1.tar.gz (from https://pypi.org/simple/torch-sparse/), version: 0.2.1
2022-12-28T10:25:21,450   Found link https://files.pythonhosted.org/packages/73/5b/5b7b6c66148afaa5e2ed8a3e18e109361957d28e67032d92cb282d173f32/torch_sparse-0.2.2.tar.gz (from https://pypi.org/simple/torch-sparse/), version: 0.2.2
2022-12-28T10:25:21,451   Found link https://files.pythonhosted.org/packages/43/2a/bb2ead5b33c6932937c6c74199ebecd72bd4b3ab224842a50366e5b2af4a/torch_sparse-0.2.3.tar.gz (from https://pypi.org/simple/torch-sparse/), version: 0.2.3
2022-12-28T10:25:21,451   Found link https://files.pythonhosted.org/packages/73/72/e374662f6f47d9ac0e082a6d5c18d14e15c52863e89c6bc6957a0d2ed026/torch_sparse-0.2.4.tar.gz (from https://pypi.org/simple/torch-sparse/), version: 0.2.4
2022-12-28T10:25:21,451   Found link https://files.pythonhosted.org/packages/b0/0a/2ff678e0d04e524dd2cf990a6202ced8c0ffe3fe6b08e02f25cc9fd27da0/torch_sparse-0.4.0.tar.gz (from https://pypi.org/simple/torch-sparse/), version: 0.4.0
2022-12-28T10:25:21,451   Found link https://files.pythonhosted.org/packages/c7/3e/aa5449787910283d846a7c739899ccf8c53c914f8a7aee7bc500a32dc091/torch_sparse-0.4.1.tar.gz (from https://pypi.org/simple/torch-sparse/), version: 0.4.1
2022-12-28T10:25:21,451   Found link https://files.pythonhosted.org/packages/7d/c5/1f73917168aa9816f41e0696f266fa07d0ebfe8d25c3e63a0f08440534b9/torch_sparse-0.4.2.tar.gz (from https://pypi.org/simple/torch-sparse/), version: 0.4.2
2022-12-28T10:25:21,451   Found link https://files.pythonhosted.org/packages/08/4e/a268613fa6a92ffbc65b89e66fc8be5590801937185007f0f7bcb75ea21f/torch_sparse-0.4.3.tar.gz (from https://pypi.org/simple/torch-sparse/), version: 0.4.3
2022-12-28T10:25:21,451   Found link https://files.pythonhosted.org/packages/0e/bf/6242893c898621e7e4756e1ad298e903df6dfae208aec1c32adf8cfd1f7f/torch_sparse-0.4.4.tar.gz (from https://pypi.org/simple/torch-sparse/), version: 0.4.4
2022-12-28T10:25:21,451   Found link https://files.pythonhosted.org/packages/92/80/7137d14dac46d515373d8b3eb47e2565ecfd646ba8658a6a6a1c24e49a2c/torch_sparse-0.5.1.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.6), version: 0.5.1
2022-12-28T10:25:21,451   Found link https://files.pythonhosted.org/packages/11/17/03bd3a1f056d971e498bd1ad818bbde3dd5409c845ed2ce76186fec65dd2/torch_sparse-0.6.0.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.6), version: 0.6.0
2022-12-28T10:25:21,451   Found link https://files.pythonhosted.org/packages/12/9e/66247cbc250e746d06de35c6eb226ec39f4cb4be46adf6ee27527915910b/torch_sparse-0.6.1.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.6), version: 0.6.1
2022-12-28T10:25:21,452   Found link https://files.pythonhosted.org/packages/dc/65/ee198eae5c517cfc6d05473bf4ec8593830dc61446ffd65fdb7cd3b469ce/torch_sparse-0.6.3.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.6), version: 0.6.3
2022-12-28T10:25:21,452   Found link https://files.pythonhosted.org/packages/92/d4/7261b5ee3ff529ac3652fda2ad9757c0fb3cde514014a9c26fe71bad38e9/torch_sparse-0.6.4.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.6), version: 0.6.4
2022-12-28T10:25:21,452   Found link https://files.pythonhosted.org/packages/18/0d/a0ab465c6fd30318e8ce2c121424fb09573e46eb16231e6fedb6ddd953f5/torch_sparse-0.6.5.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.6), version: 0.6.5
2022-12-28T10:25:21,452   Found link https://files.pythonhosted.org/packages/db/d1/968436c29959c321740ee95f781c961f12b2d23f0ecdbdaaf3ccf64ddc94/torch_sparse-0.6.6.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.6), version: 0.6.6
2022-12-28T10:25:21,452   Found link https://files.pythonhosted.org/packages/ce/c0/f5ccc280629765cf1e97b601426cad6170d00603cf9836ba52f85d44ac27/torch_sparse-0.6.7.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.6), version: 0.6.7
2022-12-28T10:25:21,452   Found link https://files.pythonhosted.org/packages/3c/dd/f34dce6512a3922948c3ac0cf50cceb2eeafeedd34a278d502eb77d07dc0/torch_sparse-0.6.8.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.6), version: 0.6.8
2022-12-28T10:25:21,453   Found link https://files.pythonhosted.org/packages/9a/86/699eb78ea7ce259da7f9953858ec2a064e4e5f5e6bf7de53aa6c8bb8b9a8/torch_sparse-0.6.9.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.6), version: 0.6.9
2022-12-28T10:25:21,453   Found link https://files.pythonhosted.org/packages/c7/49/c97315cd579a19d4e575ca06dd8f79f43c00c9c38658fbe91116cd7909dd/torch_sparse-0.6.10.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.6), version: 0.6.10
2022-12-28T10:25:21,453   Found link https://files.pythonhosted.org/packages/5a/81/f66f60ef6ce915ca54a4fcd0c97ec8a1a802312c1774caf329a866ebbf31/torch_sparse-0.6.11.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.6), version: 0.6.11
2022-12-28T10:25:21,453   Found link https://files.pythonhosted.org/packages/00/40/208c5b8ae34c89403d9da648c9689465880539d95a4ad570ac9d6f301b72/torch_sparse-0.6.12.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.6), version: 0.6.12
2022-12-28T10:25:21,453   Found link https://files.pythonhosted.org/packages/ee/44/b4a1d6d7fa67309781005c0e36723dd0bd745fc1a20c9330796055953b10/torch_sparse-0.6.13.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.7), version: 0.6.13
2022-12-28T10:25:21,453   Found link https://files.pythonhosted.org/packages/ed/f0/8d198555417336fac1b56c23b50699717cfc743f5d6bd5d1ece59695aa4c/torch_sparse-0.6.14.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.7), version: 0.6.14
2022-12-28T10:25:21,454   Found link https://files.pythonhosted.org/packages/6d/79/df42a4bf93191ff44d31ba58eb3ec98a02dfb7402fac34852f864c4b3999/torch_sparse-0.6.15.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.7), version: 0.6.15
2022-12-28T10:25:21,454   Found link https://files.pythonhosted.org/packages/88/e8/9e75676a3415d438fdb354b5ee0ffac777eb447fe4924224beef7529ea43/torch_sparse-0.6.16.tar.gz (from https://pypi.org/simple/torch-sparse/) (requires-python:>=3.7), version: 0.6.16
2022-12-28T10:25:21,454 Skipping link: not a file: https://pypi.org/simple/torch-sparse/
2022-12-28T10:25:21,454 Given no hashes to check 28 links for project 'torch-sparse': discarding no candidates
2022-12-28T10:25:21,460 Collecting torch-sparse
2022-12-28T10:25:21,460   Created temporary directory: /tmp/pip-unpack-_1eqrqa0
2022-12-28T10:25:21,547   Downloading torch_sparse-0.6.16.tar.gz (208 kB)
2022-12-28T10:25:21,631   Added torch-sparse from https://files.pythonhosted.org/packages/88/e8/9e75676a3415d438fdb354b5ee0ffac777eb447fe4924224beef7529ea43/torch_sparse-0.6.16.tar.gz to build tracker '/tmp/pip-build-tracker-gmiksno8'
2022-12-28T10:25:21,631   Running setup.py (path:/tmp/pip-install-jk68wc1w/torch-sparse_4cfd046830464f848b1b2f060f20b4f3/setup.py) egg_info for package torch-sparse
2022-12-28T10:25:21,631   Created temporary directory: /tmp/pip-pip-egg-info-t5c1fmen
2022-12-28T10:25:21,631   Running command python setup.py egg_info
2022-12-28T10:25:22,855   running egg_info
2022-12-28T10:25:22,856   creating /tmp/pip-pip-egg-info-t5c1fmen/torch_sparse.egg-info
2022-12-28T10:25:22,863   writing /tmp/pip-pip-egg-info-t5c1fmen/torch_sparse.egg-info/PKG-INFO
2022-12-28T10:25:22,863   writing dependency_links to /tmp/pip-pip-egg-info-t5c1fmen/torch_sparse.egg-info/dependency_links.txt
2022-12-28T10:25:22,863   writing requirements to /tmp/pip-pip-egg-info-t5c1fmen/torch_sparse.egg-info/requires.txt
2022-12-28T10:25:22,863   writing top-level names to /tmp/pip-pip-egg-info-t5c1fmen/torch_sparse.egg-info/top_level.txt
2022-12-28T10:25:22,866   writing manifest file '/tmp/pip-pip-egg-info-t5c1fmen/torch_sparse.egg-info/SOURCES.txt'
2022-12-28T10:25:22,899   listing git files failed - pretending there aren't any
2022-12-28T10:25:22,900   reading manifest file '/tmp/pip-pip-egg-info-t5c1fmen/torch_sparse.egg-info/SOURCES.txt'
2022-12-28T10:25:22,900   reading manifest template 'MANIFEST.in'
2022-12-28T10:25:22,902   warning: no previously-included files matching '*' found under directory 'third_party/parallel-hashmap/css'
2022-12-28T10:25:22,902   warning: no previously-included files matching '*' found under directory 'third_party/parallel-hashmap/html'
2022-12-28T10:25:22,902   warning: no previously-included files matching '*' found under directory 'third_party/parallel-hashmap/tests'
2022-12-28T10:25:22,903   warning: no previously-included files matching '*' found under directory 'third_party/parallel-hashmap/examples'
2022-12-28T10:25:22,903   warning: no previously-included files matching '*' found under directory 'third_party/parallel-hashmap/benchmark'
2022-12-28T10:25:22,903   warning: no previously-included files matching '*' found under directory 'test'
2022-12-28T10:25:22,903   warning: no previously-included files matching '*' found under directory 'benchmark'
2022-12-28T10:25:22,903   adding license file 'LICENSE'
2022-12-28T10:25:22,904   writing manifest file '/tmp/pip-pip-egg-info-t5c1fmen/torch_sparse.egg-info/SOURCES.txt'
2022-12-28T10:25:23,083   Source in /tmp/pip-install-jk68wc1w/torch-sparse_4cfd046830464f848b1b2f060f20b4f3 has version 0.6.16, which satisfies requirement torch-sparse from https://files.pythonhosted.org/packages/88/e8/9e75676a3415d438fdb354b5ee0ffac777eb447fe4924224beef7529ea43/torch_sparse-0.6.16.tar.gz
2022-12-28T10:25:23,083   Removed torch-sparse from https://files.pythonhosted.org/packages/88/e8/9e75676a3415d438fdb354b5ee0ffac777eb447fe4924224beef7529ea43/torch_sparse-0.6.16.tar.gz from build tracker '/tmp/pip-build-tracker-gmiksno8'
2022-12-28T10:25:23,087 Requirement already satisfied: scipy in /home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages (from torch-sparse) (1.8.1)
2022-12-28T10:25:23,089 Requirement already satisfied: numpy<1.25.0,>=1.17.3 in /home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages (from scipy->torch-sparse) (1.23.5)
2022-12-28T10:25:23,090 Created temporary directory: /tmp/pip-unpack-5a4yx_p9
2022-12-28T10:25:23,091 Building wheels for collected packages: torch-sparse
2022-12-28T10:25:23,092   Created temporary directory: /tmp/pip-wheel-gesscvui
2022-12-28T10:25:23,092   Destination directory: /tmp/pip-wheel-gesscvui
2022-12-28T10:25:23,092   Running command python setup.py bdist_wheel
2022-12-28T10:25:24,270   running bdist_wheel
2022-12-28T10:25:24,291   running build
2022-12-28T10:25:24,291   running build_py
2022-12-28T10:25:24,299   creating build
2022-12-28T10:25:24,299   creating build/lib.linux-x86_64-cpython-310
2022-12-28T10:25:24,299   creating build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,299   copying torch_sparse/bandwidth.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,299   copying torch_sparse/coalesce.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,299   copying torch_sparse/reduce.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,299   copying torch_sparse/eye.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,300   copying torch_sparse/spmm.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,300   copying torch_sparse/masked_select.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,300   copying torch_sparse/diag.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,300   copying torch_sparse/permute.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,300   copying torch_sparse/mul.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,300   copying torch_sparse/convert.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,300   copying torch_sparse/metis.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,300   copying torch_sparse/spspmm.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,301   copying torch_sparse/transpose.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,301   copying torch_sparse/sample.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,301   copying torch_sparse/matmul.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,301   copying torch_sparse/index_select.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,301   copying torch_sparse/storage.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,301   copying torch_sparse/utils.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,301   copying torch_sparse/testing.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,301   copying torch_sparse/cat.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,302   copying torch_sparse/add.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,302   copying torch_sparse/select.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,302   copying torch_sparse/narrow.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,302   copying torch_sparse/spadd.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,302   copying torch_sparse/__init__.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,302   copying torch_sparse/rw.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,302   copying torch_sparse/saint.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,303   copying torch_sparse/tensor.py -> build/lib.linux-x86_64-cpython-310/torch_sparse
2022-12-28T10:25:24,303   running egg_info
2022-12-28T10:25:24,319   writing torch_sparse.egg-info/PKG-INFO
2022-12-28T10:25:24,319   writing dependency_links to torch_sparse.egg-info/dependency_links.txt
2022-12-28T10:25:24,319   writing requirements to torch_sparse.egg-info/requires.txt
2022-12-28T10:25:24,319   writing top-level names to torch_sparse.egg-info/top_level.txt
2022-12-28T10:25:24,336   listing git files failed - pretending there aren't any
2022-12-28T10:25:24,337   reading manifest file 'torch_sparse.egg-info/SOURCES.txt'
2022-12-28T10:25:24,337   reading manifest template 'MANIFEST.in'
2022-12-28T10:25:24,339   warning: no previously-included files matching '*' found under directory 'third_party/parallel-hashmap/css'
2022-12-28T10:25:24,339   warning: no previously-included files matching '*' found under directory 'third_party/parallel-hashmap/html'
2022-12-28T10:25:24,339   warning: no previously-included files matching '*' found under directory 'third_party/parallel-hashmap/tests'
2022-12-28T10:25:24,340   warning: no previously-included files matching '*' found under directory 'third_party/parallel-hashmap/examples'
2022-12-28T10:25:24,340   warning: no previously-included files matching '*' found under directory 'third_party/parallel-hashmap/benchmark'
2022-12-28T10:25:24,340   warning: no previously-included files matching '*' found under directory 'test'
2022-12-28T10:25:24,340   warning: no previously-included files matching '*' found under directory 'benchmark'
2022-12-28T10:25:24,340   adding license file 'LICENSE'
2022-12-28T10:25:24,342   writing manifest file 'torch_sparse.egg-info/SOURCES.txt'
2022-12-28T10:25:24,343   running build_ext
2022-12-28T10:25:24,352   building 'torch_sparse._rw_cpu' extension
2022-12-28T10:25:24,352   creating build/temp.linux-x86_64-cpython-310
2022-12-28T10:25:24,352   creating build/temp.linux-x86_64-cpython-310/csrc
2022-12-28T10:25:24,352   creating build/temp.linux-x86_64-cpython-310/csrc/cpu
2022-12-28T10:25:24,352   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/cpu/rw_cpu.cpp -o build/temp.linux-x86_64-cpython-310/csrc/cpu/rw_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_rw_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:25:42,233   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/rw.cpp -o build/temp.linux-x86_64-cpython-310/csrc/rw.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_rw_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:25:59,973   g++ -pthread -shared build/temp.linux-x86_64-cpython-310/csrc/cpu/rw_cpu.o build/temp.linux-x86_64-cpython-310/csrc/rw.o -L/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-cpython-310/torch_sparse/_rw_cpu.so -s
2022-12-28T10:26:00,266   building 'torch_sparse._diag_cpu' extension
2022-12-28T10:26:00,266   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/cpu/diag_cpu.cpp -o build/temp.linux-x86_64-cpython-310/csrc/cpu/diag_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_diag_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:26:16,935   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/diag.cpp -o build/temp.linux-x86_64-cpython-310/csrc/diag.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_diag_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:26:34,497   g++ -pthread -shared build/temp.linux-x86_64-cpython-310/csrc/cpu/diag_cpu.o build/temp.linux-x86_64-cpython-310/csrc/diag.o -L/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-cpython-310/torch_sparse/_diag_cpu.so -s
2022-12-28T10:26:34,761   building 'torch_sparse._sample_cpu' extension
2022-12-28T10:26:34,761   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/cpu/sample_cpu.cpp -o build/temp.linux-x86_64-cpython-310/csrc/cpu/sample_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_sample_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:26:53,089   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/sample.cpp -o build/temp.linux-x86_64-cpython-310/csrc/sample.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_sample_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:27:13,608   g++ -pthread -shared build/temp.linux-x86_64-cpython-310/csrc/cpu/sample_cpu.o build/temp.linux-x86_64-cpython-310/csrc/sample.o -L/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-cpython-310/torch_sparse/_sample_cpu.so -s
2022-12-28T10:27:13,888   building 'torch_sparse._spmm_cpu' extension
2022-12-28T10:27:13,888   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/cpu/spmm_cpu.cpp -o build/temp.linux-x86_64-cpython-310/csrc/cpu/spmm_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_spmm_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:27:43,746   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/spmm.cpp -o build/temp.linux-x86_64-cpython-310/csrc/spmm.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_spmm_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:28:05,645   g++ -pthread -shared build/temp.linux-x86_64-cpython-310/csrc/cpu/spmm_cpu.o build/temp.linux-x86_64-cpython-310/csrc/spmm.o -L/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-cpython-310/torch_sparse/_spmm_cpu.so -s
2022-12-28T10:28:05,915   building 'torch_sparse._version_cpu' extension
2022-12-28T10:28:05,915   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/version.cpp -o build/temp.linux-x86_64-cpython-310/csrc/version.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_version_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:28:14,434   g++ -pthread -shared build/temp.linux-x86_64-cpython-310/csrc/version.o -L/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-cpython-310/torch_sparse/_version_cpu.so -s
2022-12-28T10:28:14,699   building 'torch_sparse._saint_cpu' extension
2022-12-28T10:28:14,699   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/cpu/saint_cpu.cpp -o build/temp.linux-x86_64-cpython-310/csrc/cpu/saint_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_saint_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:28:32,041   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/saint.cpp -o build/temp.linux-x86_64-cpython-310/csrc/saint.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_saint_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:28:49,945   g++ -pthread -shared build/temp.linux-x86_64-cpython-310/csrc/cpu/saint_cpu.o build/temp.linux-x86_64-cpython-310/csrc/saint.o -L/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-cpython-310/torch_sparse/_saint_cpu.so -s
2022-12-28T10:28:50,205   building 'torch_sparse._neighbor_sample_cpu' extension
2022-12-28T10:28:50,205   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/cpu/neighbor_sample_cpu.cpp -o build/temp.linux-x86_64-cpython-310/csrc/cpu/neighbor_sample_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_neighbor_sample_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:29:13,730   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/neighbor_sample.cpp -o build/temp.linux-x86_64-cpython-310/csrc/neighbor_sample.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_neighbor_sample_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:29:33,073   g++ -pthread -shared build/temp.linux-x86_64-cpython-310/csrc/cpu/neighbor_sample_cpu.o build/temp.linux-x86_64-cpython-310/csrc/neighbor_sample.o -L/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-cpython-310/torch_sparse/_neighbor_sample_cpu.so -s
2022-12-28T10:29:33,347   building 'torch_sparse._ego_sample_cpu' extension
2022-12-28T10:29:33,348   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/cpu/ego_sample_cpu.cpp -o build/temp.linux-x86_64-cpython-310/csrc/cpu/ego_sample_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_ego_sample_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:29:51,122   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/ego_sample.cpp -o build/temp.linux-x86_64-cpython-310/csrc/ego_sample.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_ego_sample_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:30:09,172   g++ -pthread -shared build/temp.linux-x86_64-cpython-310/csrc/cpu/ego_sample_cpu.o build/temp.linux-x86_64-cpython-310/csrc/ego_sample.o -L/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-cpython-310/torch_sparse/_ego_sample_cpu.so -s
2022-12-28T10:30:09,480   building 'torch_sparse._metis_cpu' extension
2022-12-28T10:30:09,480   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/cpu/metis_cpu.cpp -o build/temp.linux-x86_64-cpython-310/csrc/cpu/metis_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_metis_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:30:26,755   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/metis.cpp -o build/temp.linux-x86_64-cpython-310/csrc/metis.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_metis_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:30:45,125   g++ -pthread -shared build/temp.linux-x86_64-cpython-310/csrc/cpu/metis_cpu.o build/temp.linux-x86_64-cpython-310/csrc/metis.o -L/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-cpython-310/torch_sparse/_metis_cpu.so -s
2022-12-28T10:30:45,394   building 'torch_sparse._relabel_cpu' extension
2022-12-28T10:30:45,394   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/cpu/relabel_cpu.cpp -o build/temp.linux-x86_64-cpython-310/csrc/cpu/relabel_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_relabel_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:31:02,977   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/relabel.cpp -o build/temp.linux-x86_64-cpython-310/csrc/relabel.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_relabel_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:31:21,367   g++ -pthread -shared build/temp.linux-x86_64-cpython-310/csrc/cpu/relabel_cpu.o build/temp.linux-x86_64-cpython-310/csrc/relabel.o -L/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-cpython-310/torch_sparse/_relabel_cpu.so -s
2022-12-28T10:31:21,628   building 'torch_sparse._convert_cpu' extension
2022-12-28T10:31:21,629   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/convert.cpp -o build/temp.linux-x86_64-cpython-310/csrc/convert.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_convert_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:31:40,141   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/cpu/convert_cpu.cpp -o build/temp.linux-x86_64-cpython-310/csrc/cpu/convert_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_convert_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:31:56,921   g++ -pthread -shared build/temp.linux-x86_64-cpython-310/csrc/convert.o build/temp.linux-x86_64-cpython-310/csrc/cpu/convert_cpu.o -L/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-cpython-310/torch_sparse/_convert_cpu.so -s
2022-12-28T10:31:57,162   building 'torch_sparse._hgt_sample_cpu' extension
2022-12-28T10:31:57,162   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/cpu/hgt_sample_cpu.cpp -o build/temp.linux-x86_64-cpython-310/csrc/cpu/hgt_sample_cpu.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_hgt_sample_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:32:16,137   gcc -pthread -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -fPIC -DWITH_PYTHON -Icsrc -Ithird_party/parallel-hashmap -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/torch/csrc/api/include -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/TH -I/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/include/THC -I/home/pamuklu/PycharmProjects/environments/env310/include -I/usr/local/include/python3.10 -c csrc/hgt_sample.cpp -o build/temp.linux-x86_64-cpython-310/csrc/hgt_sample.o -O3 -Wno-sign-compare -DAT_PARALLEL_OPENMP -fopenmp -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE=\"_gcc\" -DPYBIND11_STDLIB=\"_libstdcpp\" -DPYBIND11_BUILD_ABI=\"_cxxabi1011\" -DTORCH_EXTENSION_NAME=_hgt_sample_cpu -D_GLIBCXX_USE_CXX11_ABI=0 -std=c++14
2022-12-28T10:32:34,256   g++ -pthread -shared build/temp.linux-x86_64-cpython-310/csrc/cpu/hgt_sample_cpu.o build/temp.linux-x86_64-cpython-310/csrc/hgt_sample.o -L/home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/torch/lib -lc10 -ltorch -ltorch_cpu -ltorch_python -o build/lib.linux-x86_64-cpython-310/torch_sparse/_hgt_sample_cpu.so -s
2022-12-28T10:32:34,564   /home/pamuklu/PycharmProjects/environments/env310/lib/python3.10/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
2022-12-28T10:32:34,564     warnings.warn(
2022-12-28T10:32:34,572   installing to build/bdist.linux-x86_64/wheel
2022-12-28T10:32:34,572   running install
2022-12-28T10:32:34,577   running install_lib
2022-12-28T10:32:34,585   creating build/bdist.linux-x86_64
2022-12-28T10:32:34,585   creating build/bdist.linux-x86_64/wheel
2022-12-28T10:32:34,585   creating build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,585   copying build/lib.linux-x86_64-cpython-310/torch_sparse/bandwidth.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,586   copying build/lib.linux-x86_64-cpython-310/torch_sparse/coalesce.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,586   copying build/lib.linux-x86_64-cpython-310/torch_sparse/_relabel_cpu.so -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,586   copying build/lib.linux-x86_64-cpython-310/torch_sparse/reduce.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,586   copying build/lib.linux-x86_64-cpython-310/torch_sparse/eye.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,586   copying build/lib.linux-x86_64-cpython-310/torch_sparse/spmm.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,586   copying build/lib.linux-x86_64-cpython-310/torch_sparse/masked_select.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,586   copying build/lib.linux-x86_64-cpython-310/torch_sparse/diag.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,586   copying build/lib.linux-x86_64-cpython-310/torch_sparse/permute.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,586   copying build/lib.linux-x86_64-cpython-310/torch_sparse/mul.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,587   copying build/lib.linux-x86_64-cpython-310/torch_sparse/convert.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,587   copying build/lib.linux-x86_64-cpython-310/torch_sparse/metis.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,587   copying build/lib.linux-x86_64-cpython-310/torch_sparse/spspmm.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,587   copying build/lib.linux-x86_64-cpython-310/torch_sparse/transpose.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,587   copying build/lib.linux-x86_64-cpython-310/torch_sparse/sample.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,587   copying build/lib.linux-x86_64-cpython-310/torch_sparse/matmul.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,587   copying build/lib.linux-x86_64-cpython-310/torch_sparse/_diag_cpu.so -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,587   copying build/lib.linux-x86_64-cpython-310/torch_sparse/_spmm_cpu.so -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,588   copying build/lib.linux-x86_64-cpython-310/torch_sparse/index_select.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,588   copying build/lib.linux-x86_64-cpython-310/torch_sparse/_version_cpu.so -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,588   copying build/lib.linux-x86_64-cpython-310/torch_sparse/_sample_cpu.so -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,588   copying build/lib.linux-x86_64-cpython-310/torch_sparse/storage.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,589   copying build/lib.linux-x86_64-cpython-310/torch_sparse/_neighbor_sample_cpu.so -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,589   copying build/lib.linux-x86_64-cpython-310/torch_sparse/utils.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,589   copying build/lib.linux-x86_64-cpython-310/torch_sparse/testing.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,589   copying build/lib.linux-x86_64-cpython-310/torch_sparse/_ego_sample_cpu.so -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,589   copying build/lib.linux-x86_64-cpython-310/torch_sparse/_hgt_sample_cpu.so -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,590   copying build/lib.linux-x86_64-cpython-310/torch_sparse/cat.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,590   copying build/lib.linux-x86_64-cpython-310/torch_sparse/add.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,590   copying build/lib.linux-x86_64-cpython-310/torch_sparse/select.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,590   copying build/lib.linux-x86_64-cpython-310/torch_sparse/narrow.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,590   copying build/lib.linux-x86_64-cpython-310/torch_sparse/spadd.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,590   copying build/lib.linux-x86_64-cpython-310/torch_sparse/__init__.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,590   copying build/lib.linux-x86_64-cpython-310/torch_sparse/rw.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,590   copying build/lib.linux-x86_64-cpython-310/torch_sparse/_rw_cpu.so -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,591   copying build/lib.linux-x86_64-cpython-310/torch_sparse/saint.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,591   copying build/lib.linux-x86_64-cpython-310/torch_sparse/_metis_cpu.so -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,591   copying build/lib.linux-x86_64-cpython-310/torch_sparse/tensor.py -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,591   copying build/lib.linux-x86_64-cpython-310/torch_sparse/_convert_cpu.so -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,591   copying build/lib.linux-x86_64-cpython-310/torch_sparse/_saint_cpu.so -> build/bdist.linux-x86_64/wheel/torch_sparse
2022-12-28T10:32:34,592   running install_egg_info
2022-12-28T10:32:34,600   Copying torch_sparse.egg-info to build/bdist.linux-x86_64/wheel/torch_sparse-0.6.16-py3.10.egg-info
2022-12-28T10:32:34,601   running install_scripts
2022-12-28T10:32:34,620   creating build/bdist.linux-x86_64/wheel/torch_sparse-0.6.16.dist-info/WHEEL
2022-12-28T10:32:34,620   creating '/tmp/pip-wheel-gesscvui/torch_sparse-0.6.16-cp310-cp310-linux_x86_64.whl' and adding 'build/bdist.linux-x86_64/wheel' to it
2022-12-28T10:32:34,621   adding 'torch_sparse/__init__.py'
2022-12-28T10:32:34,627   adding 'torch_sparse/_convert_cpu.so'
2022-12-28T10:32:34,633   adding 'torch_sparse/_diag_cpu.so'
2022-12-28T10:32:34,641   adding 'torch_sparse/_ego_sample_cpu.so'
2022-12-28T10:32:34,650   adding 'torch_sparse/_hgt_sample_cpu.so'
2022-12-28T10:32:34,656   adding 'torch_sparse/_metis_cpu.so'
2022-12-28T10:32:34,670   adding 'torch_sparse/_neighbor_sample_cpu.so'
2022-12-28T10:32:34,678   adding 'torch_sparse/_relabel_cpu.so'
2022-12-28T10:32:34,684   adding 'torch_sparse/_rw_cpu.so'
2022-12-28T10:32:34,690   adding 'torch_sparse/_saint_cpu.so'
2022-12-28T10:32:34,697   adding 'torch_sparse/_sample_cpu.so'
2022-12-28T10:32:34,720   adding 'torch_sparse/_spmm_cpu.so'
2022-12-28T10:32:34,722   adding 'torch_sparse/_version_cpu.so'
2022-12-28T10:32:34,723   adding 'torch_sparse/add.py'
2022-12-28T10:32:34,723   adding 'torch_sparse/bandwidth.py'
2022-12-28T10:32:34,723   adding 'torch_sparse/cat.py'
2022-12-28T10:32:34,723   adding 'torch_sparse/coalesce.py'
2022-12-28T10:32:34,724   adding 'torch_sparse/convert.py'
2022-12-28T10:32:34,724   adding 'torch_sparse/diag.py'
2022-12-28T10:32:34,724   adding 'torch_sparse/eye.py'
2022-12-28T10:32:34,724   adding 'torch_sparse/index_select.py'
2022-12-28T10:32:34,724   adding 'torch_sparse/masked_select.py'
2022-12-28T10:32:34,725   adding 'torch_sparse/matmul.py'
2022-12-28T10:32:34,725   adding 'torch_sparse/metis.py'
2022-12-28T10:32:34,725   adding 'torch_sparse/mul.py'
2022-12-28T10:32:34,725   adding 'torch_sparse/narrow.py'
2022-12-28T10:32:34,725   adding 'torch_sparse/permute.py'
2022-12-28T10:32:34,726   adding 'torch_sparse/reduce.py'
2022-12-28T10:32:34,726   adding 'torch_sparse/rw.py'
2022-12-28T10:32:34,726   adding 'torch_sparse/saint.py'
2022-12-28T10:32:34,726   adding 'torch_sparse/sample.py'
2022-12-28T10:32:34,726   adding 'torch_sparse/select.py'
2022-12-28T10:32:34,726   adding 'torch_sparse/spadd.py'
2022-12-28T10:32:34,727   adding 'torch_sparse/spmm.py'
2022-12-28T10:32:34,727   adding 'torch_sparse/spspmm.py'
2022-12-28T10:32:34,727   adding 'torch_sparse/storage.py'
2022-12-28T10:32:34,728   adding 'torch_sparse/tensor.py'
2022-12-28T10:32:34,728   adding 'torch_sparse/testing.py'
2022-12-28T10:32:34,728   adding 'torch_sparse/transpose.py'
2022-12-28T10:32:34,728   adding 'torch_sparse/utils.py'
2022-12-28T10:32:34,729   adding 'torch_sparse-0.6.16.dist-info/LICENSE'
2022-12-28T10:32:34,729   adding 'torch_sparse-0.6.16.dist-info/METADATA'
2022-12-28T10:32:34,729   adding 'torch_sparse-0.6.16.dist-info/WHEEL'
2022-12-28T10:32:34,729   adding 'torch_sparse-0.6.16.dist-info/top_level.txt'
2022-12-28T10:32:34,730   adding 'torch_sparse-0.6.16.dist-info/RECORD'
2022-12-28T10:32:34,730   removing build/bdist.linux-x86_64/wheel
2022-12-28T10:32:34,964   Created wheel for torch-sparse: filename=torch_sparse-0.6.16-cp310-cp310-linux_x86_64.whl size=1036697 sha256=a92c4f6701c2c4f3f347c99f87923cb67dbd35724ec93c33938ac17179c979ed
2022-12-28T10:32:34,964   Stored in directory: /home/pamuklu/.cache/pip/wheels/65/32/9a/f8e18293078bbd4fcca99570ea5b2798f758d1f559d7741917
2022-12-28T10:32:34,966 Successfully built torch-sparse
2022-12-28T10:32:35,932 Installing collected packages: torch-scatter, torch-sparse


2022-12-28T10:32:36,025 Successfully installed torch-scatter-2.1.0 torch-sparse-0.6.16
2022-12-28T10:32:36,029 1 location(s) to search for versions of pip:
2022-12-28T10:32:36,029 * https://pypi.org/simple/pip/
2022-12-28T10:32:36,030 Fetching project page and analyzing links: https://pypi.org/simple/pip/
2022-12-28T10:32:36,030 Getting page https://pypi.org/simple/pip/
2022-12-28T10:32:36,030 Found index url https://pypi.org/simple
2022-12-28T10:32:36,080 Fetched page https://pypi.org/simple/pip/ as application/vnd.pypi.simple.v1+json
2022-12-28T10:32:36,088   Found link https://files.pythonhosted.org/packages/3d/9d/1e313763bdfb6a48977b65829c6ce2a43eaae29ea2f907c8bbef024a7219/pip-0.2.tar.gz (from https://pypi.org/simple/pip/), version: 0.2
2022-12-28T10:32:36,088   Found link https://files.pythonhosted.org/packages/18/ad/c0fe6cdfe1643a19ef027c7168572dac6283b80a384ddf21b75b921877da/pip-0.2.1.tar.gz (from https://pypi.org/simple/pip/), version: 0.2.1
2022-12-28T10:32:36,088   Found link https://files.pythonhosted.org/packages/17/05/f66144ef69b436d07f8eeeb28b7f77137f80de4bf60349ec6f0f9509e801/pip-0.3.tar.gz (from https://pypi.org/simple/pip/), version: 0.3
2022-12-28T10:32:36,088   Found link https://files.pythonhosted.org/packages/0a/bb/d087c9a1415f8726e683791c0b2943c53f2b76e69f527f2e2b2e9f9e7b5c/pip-0.3.1.tar.gz (from https://pypi.org/simple/pip/), version: 0.3.1
2022-12-28T10:32:36,088   Found link https://files.pythonhosted.org/packages/cf/c3/153571aaac6cf999f4bb09c019b1ff379b7b599ea833813a41c784eec995/pip-0.4.tar.gz (from https://pypi.org/simple/pip/), version: 0.4
2022-12-28T10:32:36,088   Found link https://files.pythonhosted.org/packages/8d/c7/f05c87812fa5d9562ecbc5f4f1fc1570444f53c81c834a7f662af406e3c1/pip-0.5.tar.gz (from https://pypi.org/simple/pip/), version: 0.5
2022-12-28T10:32:36,088   Found link https://files.pythonhosted.org/packages/9a/aa/f536b6d14fe03343367da2ff44eee28f340ae650cd017ca088b6be13084a/pip-0.5.1.tar.gz (from https://pypi.org/simple/pip/), version: 0.5.1
2022-12-28T10:32:36,088   Found link https://files.pythonhosted.org/packages/db/e6/fdf7be8a17b032c533d3f91e91e2c63dd81d3627cbe4113248a00c2d39d8/pip-0.6.tar.gz (from https://pypi.org/simple/pip/), version: 0.6
2022-12-28T10:32:36,088   Found link https://files.pythonhosted.org/packages/91/cd/105f4d3c75d0ae18e12623acc96f42168aaba408dd6e43c4505aa21f8e37/pip-0.6.1.tar.gz (from https://pypi.org/simple/pip/), version: 0.6.1
2022-12-28T10:32:36,089   Found link https://files.pythonhosted.org/packages/1c/c7/c0e1a9413c37828faf290f29a85a4d6034c145cc04bf1622ba8beb662ad8/pip-0.6.2.tar.gz (from https://pypi.org/simple/pip/), version: 0.6.2
2022-12-28T10:32:36,089   Found link https://files.pythonhosted.org/packages/3f/af/c4b9d49fb0f286996b28dbc0955c3ad359794697eb98e0e69863908070b0/pip-0.6.3.tar.gz (from https://pypi.org/simple/pip/), version: 0.6.3
2022-12-28T10:32:36,089   Found link https://files.pythonhosted.org/packages/ec/7a/6fe91ff0079ad0437830957c459d52f3923e516f5b453218f2a93d09a427/pip-0.7.tar.gz (from https://pypi.org/simple/pip/), version: 0.7
2022-12-28T10:32:36,089   Found link https://files.pythonhosted.org/packages/a5/63/11303863c2f5e9d9a15d89fcf7513a4b60987007d418862e0fb65c09fff7/pip-0.7.1.tar.gz (from https://pypi.org/simple/pip/), version: 0.7.1
2022-12-28T10:32:36,089   Found link https://files.pythonhosted.org/packages/cd/a9/1debaa96bbc1005c1c8ad3b79fec58c198d35121546ea2e858ce0894268a/pip-0.7.2.tar.gz (from https://pypi.org/simple/pip/), version: 0.7.2
2022-12-28T10:32:36,089   Found link https://files.pythonhosted.org/packages/74/54/f785c327fb3d163560a879b36edae5c78ee07806be282c9d4807f6be7dd1/pip-0.8.tar.gz (from https://pypi.org/simple/pip/), version: 0.8
2022-12-28T10:32:36,089   Found link https://files.pythonhosted.org/packages/5c/79/5e8381cc3078bae92166f2ba96de8355e8c181926505ba8882f7b099a500/pip-0.8.1.tar.gz (from https://pypi.org/simple/pip/), version: 0.8.1
2022-12-28T10:32:36,089   Found link https://files.pythonhosted.org/packages/17/3e/0a98ab032991518741e7e712a719633e6ae160f51b3d3e855194530fd308/pip-0.8.2.tar.gz (from https://pypi.org/simple/pip/), version: 0.8.2
2022-12-28T10:32:36,089   Found link https://files.pythonhosted.org/packages/f7/9a/943fc6d879ed7220bac2e7e53096bfe78abec88d77f2f516400e0129679e/pip-0.8.3.tar.gz (from https://pypi.org/simple/pip/), version: 0.8.3
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Dec 28 '22 15:12 TurgayPamuklu

Here is the solution I found the solve the problem: I created a new environment based on the new python 3.11 and installed the libraries from scratch, I installed the basic libraries (numpy, torch etc.) without an issue. Then when I tried to install the torch_scatter, the installation failed due to "not found Python.h" error. Then I installed the python3.11-dev which resolved that error. Now torch_scatter works fine with the latest packages. Have a great new year.

Dec 28 '22 17:12 TurgayPamuklu

Can you show me the installation log when running
pip uninstall torch-scatter torch-sparse
pip install torch-scatter torch-sparse -f https://data.pyg.org/whl/torch-1.9.0+cu111.html
Does the same error happen when importing torch_scatter? Does a manual installation of the packages work?
pip uninstall torch-scatter torch-sparse
pip install torch-scatter torch-sparse

I had the same problem with torch_scatter and this solved that. However, one phenomenon that occurred to me was during the execution of pip install torch-scatter , which results in almost an hour building the installation wheel. I do not know if this is relevant or not, but after doing pip install --upgrade pip setuptools wheel followed by pip install --upgrade pip the wheel was finally built and torch_scatter was successfully installed. I wrote this as an extra help if needed, in case somebody experiments the same problem.

Jan 18 '23 12:01 LinoComesana

pytorch_sparse pytorch_sparse copied to clipboard

segmentation fault (core dumped) when import torch_sparse

pytorch_sparse
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