wtdbg2 Circularization?

Circularization?

Open Boston1212 opened this issue 4 years ago • 4 comments

Hi,

I want to know if wtdabg2 can determine whether the strain is circularized.Thanks！！

Dec 24 '20 06:12 Boston1212

wtdbg2 doesn't check that, but you can view the assembly from <prefix>.ctg.dot (graphviz format).

Dec 24 '20 06:12 ruanjue

Thanks for your reply!!! But how to read this file,Is there any description about this file?Any advice would be helpful to me !

Dec 24 '20 07:12 Boston1212

Please have a look at http://graphviz.org/, you can convert it into a pdf file using dot -Tpdf -O <prefix>.ctg.dot.

Dec 24 '20 08:12 ruanjue

I get it,Thanks !!!

Dec 24 '20 08:12 Boston1212