gt
gt copied to clipboard
Printing tables in a loop fails with TeX/PDF output (quarto)
Description
When printing a tables in a loop I get the proper output when choosing html format (via quarto), but the tables are not printing correctly in pdf format.
Reproducible example
Here's an example quarto document (loop_test.qmd):
Here are tables of mtcars by cylinder.
```{r}
#| echo: false
#| output: asis
library(tidyverse)
library(gt)
plot_by_cyl <- function (cyl_) {
data <- mtcars %>% filter(cyl == cyl_)
print(gt(data))
# print(knitr::kable(data)). # <-- this works
}
walk(
mtcars %>% pull(cyl) %>% unique() %>% sort(),
plot_by_cyl
)
```
Expected result
When the document is rendered with quarto render loop_test.qmd --to html the individual tables show up as expected. When rendering with quarto render loop_test.qmd --to pdf, the tables do not show up. Instead each cell is printed on its own line.
When I comment out print(gt(data)) and uncomment print(knitr::kable(data)) in the code, I get the same tables in both HTML and PDF formats.
Session info
- Quarto build from the latest HEAD on 2022-05-09 (commit aa1022ff6)
- XeTeX, Version 3.141592653-2.6-0.999993 (TeX Live 2021)
- R session info
R version 4.1.2 (2021-11-01)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Catalina 10.15.7
Matrix products: default
BLAS: /Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.1/Resources/lib/libRlapack.dylib
locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] gt_0.5.0.9000 knitr_1.39 forcats_0.5.1 stringr_1.4.0
[5] dplyr_1.0.9 purrr_0.3.4 readr_2.1.2 tidyr_1.2.0
[9] tibble_3.1.7 ggplot2_3.3.6 tidyverse_1.3.1
loaded via a namespace (and not attached):
[1] cellranger_1.1.0 pillar_1.7.0 compiler_4.1.2 dbplyr_2.1.1
[5] tools_4.1.2 digest_0.6.29 jsonlite_1.8.0 lubridate_1.8.0
[9] lifecycle_1.0.1 gtable_0.3.0 pkgconfig_2.0.3 rlang_1.0.2
[13] reprex_2.0.1 rstudioapi_0.13 DBI_1.1.2 cli_3.3.0
[17] xfun_0.30 haven_2.5.0 fastmap_1.1.0 xml2_1.3.3
[21] withr_2.5.0 httr_1.4.3 fs_1.5.2 generics_0.1.2
[25] vctrs_0.4.1 hms_1.1.1 grid_4.1.2 tidyselect_1.1.2
[29] glue_1.6.2 R6_2.5.1 fansi_1.0.3 readxl_1.4.0
[33] tzdb_0.3.0 modelr_0.1.8 magrittr_2.0.3 htmltools_0.5.2
[37] backports_1.4.1 scales_1.2.0 ellipsis_0.3.2 rvest_1.0.2
[41] assertthat_0.2.1 colorspace_2.0-3 utf8_1.2.2 stringi_1.7.6
[45] munsell_0.5.0 broom_0.8.0 crayon_1.5.1