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add support for multiple input files

Open tolot27 opened this issue 5 years ago • 1 comments

This PR adds support for multiple input files and can be a workaround for #6.

tolot27 avatar May 27 '20 09:05 tolot27

I am trying to achieve this as ONT generagtes multiple fastq files, can yuo please indicate how we can launch filtlong with multiple inputs, I tried fastq_pass/*.fastq.gz and <(zcat fastq_pass/*.fastq.gz) as last argument and they both did only one pass and died. My only workaround is to zcat the multiple to a single first then run filtlong on this (loosing time and disk space in the process) thanks for any example command that works

splaisan avatar Nov 06 '23 08:11 splaisan