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Published 20 hours ago • verified publisher icon rrwick

Feature request

Open gwaldbieser opened this issue 6 years ago • 1 comments

Can we choose whether or not to gzip the fastq files in 'bin'? Alternately, can deepbinner bin make use of pigz to compress the files?

gwaldbieser avatar Jul 26 '18 14:07 gwaldbieser

Okay, I've implemented this in a fairly simple way: if Deepbinner sees that pigz is available, it uses that instead of gzip. There is still no option to not zip at all... is that important to you?

You'll find the change on the master branch, and a new release of Deepbinner (v0.2.0) is imminent and will have it as well.

Ryan

rrwick avatar Aug 22 '18 07:08 rrwick