rpy2

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lgautier

I'm using the following method right now: https://rpy2.github.io/doc/latest/html/pandas.html However, it would be MUCH more streamlined to have a `.to_pandas` method built in to the rpy2 dataframes. I've added a similar...

jolespin

See comments in issue #675

lgautier

Support gganimate - allow embedding gifs in notebooks

4

[gganimate](https://github.com/thomasp85/gganimate) is a popular ggplot extension allowing to add animations to plots. It can be installed from CRAN with: ``` install.packages('gganimate') ``` One needs to install `gifski` to render actual...

krassowski

Redesign converter architecture

13

**[Original report](https://bitbucket.org/rpy2/rpy2/issue/525) by Philipp A. (Bitbucket: [flyingsheep](https://bitbucket.org/flyingsheep), GitHub: [flyingsheep](https://github.com/flyingsheep)).** ---------------------------------------- Converters are unobvious, depend on global state, and have implicit dependencies that are not enforced. Converters have a hard job:...

lgautier

Importing `rpy2` before `scipy` leads to segfaults

41

**[Original report](https://bitbucket.org/rpy2/rpy2/issue/491) by Timo Kaufmann (Bitbucket: [timokau](https://bitbucket.org/timokau), GitHub: [timokau](https://github.com/timokau)).** ---------------------------------------- Sorry for opening so many tickets here :) Previously reported to `scipy` here: https://github.com/scipy/scipy/issues/9466 Apparently `lapack` always segfaults on invalid...

lgautier

mstl function in forecast package gives error

1

**[Original report](https://bitbucket.org/rpy2/rpy2/issue/586) by Nils Holgersson (Bitbucket: [Nils Holgersson](https://bitbucket.org/Nils Holgersson), ).** ---------------------------------------- When running the mstl function from the forecast package in R I am getting the following error: ‌ ```...

lgautier

Unable to run pip install rpy2 (mac)

1

**[Original report](https://bitbucket.org/rpy2/rpy2/issue/600) by MonicaS (Bitbucket: [MonicaS](https://bitbucket.org/MonicaS), GitHub: [MonicaS](https://github.com/MonicaS)).** ---------------------------------------- pip install rpy2 leads to…. * **Failed building wheel for rpy2** * **Command "/Users/msilva/anaconda3/envs/MedImageEnv2/bin/python -u -c "import setuptools, tokenize;\_\_file\_\_='/private/var/folders/cz/\_5gf33qx71l4t6rxg6qv0v8c0000gn/T/pip-install-vd6ypz8f/rpy2/setup.py';f=getattr\(tokenize, 'open', open\)\(\_\_file\_\_\);code=f.read\(\).replace\('\\r\\n',...

lgautier

R_CStackLimit = -1 causes stack size reduced warnings that cannot be suppressed when using RJava with rpy2

3

**[Original report](https://bitbucket.org/rpy2/rpy2/issue/590) by Leandro Hermida (Bitbucket: [hermidalc](https://bitbucket.org/hermidalc), GitHub: [hermidalc](https://github.com/hermidalc)).** ---------------------------------------- This warning only started with rpy2 3.x, 2.9.x did not init R\_CStackLimit = -1: [https://bitbucket.org/rpy2/rpy2/src/448ed6a23336febe1818eb3544c97d9b6c9ddfe8/rpy2/rinterface\_lib/embedded.py#lines-141](https://bitbucket.org/rpy2/rpy2/src/448ed6a23336febe1818eb3544c97d9b6c9ddfe8/rpy2/rinterface_lib/embedded.py#lines-141) I cannot seem to find...

lgautier

Incorrect conversion of `np.matrix`

16

**[Original report](https://bitbucket.org/rpy2/rpy2/issue/576) by Michaela Müller (Bitbucket: [Michaela Müller](https://bitbucket.org/Michaela Müller), ).** ---------------------------------------- When converting `np.matrix`, only the first value of the original matrix is spread in the rpy2 matrix. ``` import...

lgautier