Installation

[JacobNeumann88]

Hello, when attempting to use the demo py file I get an error that the modules " cytoself.data_loader.data_manager import DataManager from cytoself.models import CytoselfFullModel from cytoself.data_loader.data_generator import image_and_label_generator from cytoself.analysis.analytics import Analytics"

Do not exist.

[li-li-github]

Have you checked if you were using the right environment that cytoself is installed? If the issue still persists even after you reinstall everything in a clean environment, could you try installing cytoself from this repository? https://github.com/royerlab/cytoself#for-developers

[rouarouatbi]

Hey, I am also getting installation issues, even though I did use the correct environment. Cloning from git doesn't seem to work either

[li-li-github]

What issues did you get? Have you tried cytoself-pytorch branch? There may be some issues with cuda version if you use TF1.15 with newer GPUs. This pytorch version will be the mian branch.

[li-li-github]

The cytoself-pytorch is now on the main branch!

[rouarouatbi]

It works! Thank you :)