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multiple check_xml_errors when using entrez_link of protien IDs of Metagenomic assembled genomes from NCBI

Open TJrogers86 opened this issue 1 year ago • 2 comments

When I run the following I get the results I am looking for: entrez_link(db="taxonomy", dbfrom="protein", id=c("QNO56202.1","RCV65969.1","OYV13592.1", "WP_138323301.1","WP_007546357.1","KPJ68349.1", "RLB10506.1"), by_id=TRUE)

However, if I run any protein id of a MAG thats on NCBI it errors out, for example: image

However, if I take that same accession number and put it in NCBI, I get the result I am looking for: image

Am I doing something wrong?

TJrogers86 avatar Mar 25 '23 12:03 TJrogers86