magick
magick copied to clipboard
Error in magick_image_annotate
> logo1 GIF 640 480 sRGB TRUE 0 +72x+72 # A tibble: 1 x 7 format width height colorspace matte filesize density 1 GIF 640 480 sRGB TRUE 0 +72x+72 Error in magick_image_annotate(image, text, gravity, location, degrees, : R: non-conforming drawing primitive definition `text' @ error/draw.c/RenderMVGContent/4469
> sessionInfo() R version 4.1.0 (2021-05-18) Platform: x86_64-conda-linux-gnu (64-bit) Running under: CentOS Linux 7 (Core) Matrix products: default BLAS/LAPACK: /public/packages/conda/miniconda3/envs/r4-base/lib/libopenblasp-r0.3.15.so locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C [3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 [5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8 [7] LC_PAPER=en_US.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] magick_2.7.2 STutility_0.1.0 ggplot2_3.3.3 SeuratObject_4.0.1 [5] Seurat_4.0.2 loaded via a namespace (and not attached): [1] uuid_0.1-4 systemfonts_1.0.2 plyr_1.8.6 [4] igraph_1.2.6 lazyeval_0.2.2 sp_1.4-5 [7] splines_4.1.0 crosstalk_1.1.1 listenv_0.8.0 [10] scattermore_0.7 digest_0.6.27 foreach_1.5.1 [13] htmltools_0.5.1.1 viridis_0.6.1 tiff_0.1-8 [16] gdata_2.18.0 fansi_0.5.0 magrittr_2.0.1 [19] tensor_1.5 cluster_2.1.2 doParallel_1.0.16 [22] ROCR_1.0-11 globals_0.14.0 matrixStats_0.59.0 [25] gmodels_2.18.1 spatstat.sparse_2.0-0 jpeg_0.1-8.1 [28] colorspace_2.0-1 ggrepel_0.9.1 xfun_0.23 [31] dplyr_1.0.6 tcltk_4.1.0 crayon_1.4.1 [34] jsonlite_1.7.2 spatstat.data_2.1-0 zeallot_0.1.0 [37] survival_3.2-11 zoo_1.8-9 iterators_1.0.13 [40] glue_1.4.2 polyclip_1.10-0 gtable_0.3.0 [43] leiden_0.3.8 future.apply_1.7.0 abind_1.4-5 [46] scales_1.1.1 DBI_1.1.1 miniUI_0.1.1.1 [49] Rcpp_1.0.6 viridisLite_0.4.0 xtable_1.8-4 [52] spData_0.3.8 units_0.7-1 reticulate_1.20 [55] spatstat.core_2.1-2 bit_4.0.4 spdep_1.1-8 [58] proxy_0.4-25 akima_0.6-2.1 htmlwidgets_1.5.3 [61] httr_1.4.2 RColorBrewer_1.1-2 ellipsis_0.3.2 [64] ica_1.0-2 pkgconfig_2.0.3 uwot_0.1.10 [67] deldir_0.2-10 utf8_1.2.1 tidyselect_1.1.1 [70] rlang_0.4.11 manipulateWidget_0.11.0 reshape2_1.4.4 [73] later_1.2.0 munsell_0.5.0 tools_4.1.0 [76] cli_2.5.0 dbscan_1.1-8 generics_0.1.0 [79] ggridges_0.5.3 stringr_1.4.0 fastmap_1.1.0 [82] goftest_1.2-2 bit64_4.0.5 knitr_1.33 [85] fitdistrplus_1.1-5 rgl_0.106.8 purrr_0.3.4 [88] RANN_2.6.1 readbitmap_0.1.5 pbapply_1.4-3 [91] future_1.21.0 nlme_3.1-152 mime_0.10 [94] ggiraph_0.7.10 rstudioapi_0.13 hdf5r_1.3.3 [97] compiler_4.1.0 curl_4.3.1 plotly_4.9.3 [100] png_0.1-7 e1071_1.7-7 spatstat.utils_2.1-0 [103] Morpho_2.8 tibble_3.1.2 stringi_1.6.2.9004 [106] ps_1.6.0 lattice_0.20-44 Matrix_1.3-4 [109] classInt_0.4-3 shinyjs_2.0.0 vctrs_0.3.8 [112] pillar_1.6.1 LearnBayes_2.15.1 lifecycle_1.0.0 [115] spatstat.geom_2.1-0 lmtest_0.9-38 RcppAnnoy_0.0.18 [118] data.table_1.14.0 cowplot_1.1.1 irlba_2.3.3 [121] Rvcg_0.19.2 raster_3.4-10 httpuv_1.6.1 [124] patchwork_1.1.1 colorRamps_2.3 R6_2.5.0 [127] imager_0.42.8 promises_1.2.0.1 KernSmooth_2.23-20 [130] gridExtra_2.3 bmp_0.3 parallelly_1.25.0 [133] codetools_0.2-18 boot_1.3-28 MASS_7.3-54 [136] gtools_3.9.2 withr_2.4.2 sctransform_0.3.2 [139] expm_0.999-6 mgcv_1.8-36 parallel_4.1.0 [142] grid_4.1.0 rpart_4.1-15 tidyr_1.1.3 [145] coda_0.19-4 class_7.3-19 Rtsne_0.15 [148] sf_0.9-8 shiny_1.6.0 >
This usually happens when your system doesn't have fonts / fontconfig. What is your magick_config()
?
> magick_config() $version [1] ‘7.0.11.14’ $modules [1] FALSE $cairo [1] TRUE $fontconfig [1] TRUE $freetype [1] TRUE $fftw [1] TRUE $ghostscript [1] FALSE $heic [1] FALSE $jpeg [1] TRUE $lcms [1] FALSE $libopenjp2 [1] TRUE $lzma [1] TRUE $pangocairo [1] TRUE $pango [1] TRUE $png [1] TRUE $raw [1] FALSE $rsvg [1] TRUE $tiff [1] TRUE $webp [1] TRUE $wmf [1] FALSE $x11 [1] TRUE $xml [1] TRUE $`zero-configuration` [1] FALSE $threads [1] 1
A full simple example to show the error:
> library(magick) Linking to ImageMagick 7.0.11.14 Enabled features: cairo, fontconfig, freetype, fftw, pango, rsvg, webp, x11 Disabled features: ghostscript, heic, lcms, raw > logo logo format width height colorspace matte filesize density 1 GIF 640 480 sRGB FALSE 28576 +72x+72 > image_annotate(logo, "This is a test") Error in magick_image_annotate(image, text, gravity, location, degrees, : rsession: non-conforming drawing primitive definition `text' @ error/draw.c/RenderMVGContent/4469
How did you get this version of imagemagick? On my CentOS7 server, ImageMagick-devel
has version 6.9.10.68. It does not show this problem, your example works.
> library(magick)
Linking to ImageMagick 6.9.10.68
Enabled features: cairo, fontconfig, freetype, ghostscript, lcms, pango, rsvg, x11
Disabled features: fftw, heic, raw, webp
Using 8 threads
> image_annotate(logo, "This is a test")
format width height colorspace matte filesize density
1 GIF 640 480 sRGB TRUE 0 72x72
Perhaps you need to build ImageMagick with ghostscript support (I see ghostscript is disabled in your case).
This version of ImageMagick was installed through conda (conda 4.10.1).
imagemagick 7.0.11_14 pl5320hb118871_0 conda-forge r-base 4.1.0 h9e01966_1 conda-forge
OK in that case I am afraid you need to report the bug in conda :/ There seems to be something wrong with their imagemagick. I think they need to enable ghostscript.
Getting the same error message in my Github Actions package CHECK, both on ubuntu-20.04 (devel) and (release)
https://github.com/tylermorganwall/rayvertex/runs/2808437042
This happens on ubuntu when rendering text but the gsfonts
debian package is not installed. I think this should fix it: https://github.com/rstudio/r-system-requirements/pull/82
I am still facing the same issue on Linux (Solus) when trying to do image_annotate. Ghostscript is installed. Any idea how to fix this from R or outside of R?
Linking to ImageMagick 7.1.0.19 Enabled features: cairo, fontconfig, freetype, fftw, ghostscript, heic, lcms, pango, raw, rsvg, webp, x11 Disabled features: Using 6 threads