cerebroApp
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romanhaa
R package containing the Cerebro application.
Hello, do you have any plans to expand cerebroApp's compatibility with Seurat v4?
Hello guys, I used your tool to visualize dynamically the clusters and it is awesome. However, when I called `getMarkerGenes` using the same exact parameters I used in `FindAllMarkers` in...
HI, First of all thank you for this incredible pacage/app. It s really usefull to easily show analysis to non r code users. I am my self still not a...
Hi, is it possible to have simultaneous multi-users access to a single cerebroApp ? Have you already tried ? If yes, is there a kind of "competition" when one user...
Hi @romanhaa! Once again, thank you for providing such a great interface for the single-cell community in R. I particularly appreciate the fact that Cerebro uses plotly to generate the...
Hi bud! hope you're doing well. Just wanted to let you know that I've applied some of these to all my plotly graphs and it's improved the performance so much....
Wanted to try everything before I posted on here again haha 😅 Any help would be appreciated, Also talked to my colleague and once we have the data up and...
> brain.integrated brain.integrated brain.integrated brain.integrated exportFromSeurat(brain.integrated, 'my_experiment.crb') Error: Column specified in `column_sample` not found in meta data.** the Seurat object named "brain.itegrated" has had SCTransform and Integration performed on it,...
Hi @romanhaa ! Thanks again for the great app! It's truly useful. I'm having a issue when trying to use ROC test to get marker genes: ``` Error: Can't subset...
I was hoping that we could be provided with more control over the color scales in the UMAP/tSNE plots. First, being able to display the scales after log transformation. Second,...
