SETH
SETH copied to clipboard
rockt
SNP Extraction Tool for Human Variations
Add evaluation corpus from Nala https://www.ncbi.nlm.nih.gov/pubmed/28200120
Just an idea for next steps: SETH could, starting from an amino acid change, compute the underlying CDS and DNA change(s) and return them as well. This makes it much...
Some patterns return only partial matches against a longer mutation. Need to extend these patterns or create new, longer ones that have precedence over the shorter matches. Examples: 1. PMID=20806047...
Add evaluation using this corpus http://infos.korea.ac.kr/bronco/
Bumps [org.postgresql:postgresql](https://github.com/pgjdbc/pgjdbc) from 42.4.3 to 42.7.2. Release notes Sourced from org.postgresql:postgresql's releases. v42.7.1 Fixed regressions since 42.7.0 Revert "Use canonical DateStyle name (#2925)" @vlsi (#3035) Revert "feat: support SET statements...
![dependabot[bot] avatar](https://avatars.githubusercontent.com/in/29110?v=4 "dependabot[bot] avatar"){kind=avatar}
Bumps org.apache.commons:commons-compress from 1.21 to 1.26.0. [](https://docs.github.com/en/github/managing-security-vulnerabilities/about-dependabot-security-updates#about-compatibility-scores) Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a...
This is referring to the step "Parse dbSNP dump" in the section "Rebuilding the database for SNP normalization" of [this page](https://rockt.github.io/SETH/). I have wrote a port to Python for your...
