ChemSpot

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eumed-light.jar has been compiled with old version of scala 2.9.2. Need a version compiled with 2.10 Or the source code so that I can compile

pasupathym

Maven deployment

1

ChemSpot can be installed via Maven, but it would also be nice to automatically create a runnable jar, copy all required files and optionally tar/compress them

thuber

Improve normalization

1

Find more (offline) sources to retrieve IDs for chemicals from and integrate them into ChemSpot

thuber

A lot of false positives are produced by short terms like "IOP", "BMP", "CIA" or "SAM". Find a way to deal with these matches properly (and maybe separately, in a...

thuber

Wrap ChemSpot in a U-Compare compatible UIMA component

1

rockt

Suppress messages of other libraries (MALLET, OPSIN etc)

2

Use the following Snippet: ``` Java PrintStream oldErr = System.err; PrintStream newErr = new PrintStream(new ByteArrayOutputStream()); System.setErr(newErr); // do your work System.setErr(oldErr); ```

rockt

Bumps commons-net from 3.3 to 3.9.0. [](https://docs.github.com/en/github/managing-security-vulnerabilities/about-dependabot-security-updates#about-compatibility-scores) Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a...

dependabot[bot]