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Use of num_events_template [legacy]

Open iiSeymour opened this issue 3 years ago • 1 comments

Hey @roblanf

Events are no longer relevant with modern basecallers and Guppy considers all event fields in the sequence summary as legacy. A cursory look at the code suggests only num_events_template is being used to colour the read length vs. q score scatterplot and I think a switch to template_duration would be suitable?

This is in preparation for adding a summary file output in bonito as I won't be adding any event related fields.

cc @jaquol

iiSeymour avatar Aug 06 '20 18:08 iiSeymour

OK - that sounds like a good idea. Will update when it's done.

roblanf avatar Aug 07 '20 01:08 roblanf