Rob Kooper
Rob Kooper
/assign @jackielii
Same here, we have some servers in AWS that we turn off at the weekend to save money. More general know there is planned outage and would like to prevent...
(NB updated original post w/ this info) We should look at https://github.com/PecanProject/pecan/blob/ec65c3c47a080729bd31832ca258c2e1fbe96dfb/models/ed/inst/template.job#L27 "@BINARY@" "@BINARY_ARGS@" @BINARY@ comes from the database and is in the dbfiles table for that specific machine @BINARY_ARGS@...
If you look at the config.php, you can see how that works from the UI: ``` $hostlist=array($fqdn => array(), "geo.bu.edu" => array("displayname" => "geo", "qsub" => "qsub -V -N @NAME@...
since it starts from pecan/models, this include all model R files.
Following is the dependency graph: rocker/tidyverse - default R, with tidyverse pecan/depends - all our R dependencies pecan/base - compiled version of PEcAn (all pieces) pecan/models - addition of some...
can you make sure that the R path is correct?
talking to @Aariq thinking is to add new parameter to modellauncer called job, modify the code at https://github.com/PecanProject/pecan/blob/develop/base/workflow/R/start_model_runs.R#L117 to pass that parameter to setup and write it at https://github.com/PecanProject/pecan/blob/develop/base/workflow/R/start_model_runs.R#L117 to...
Would this work? https://rdrr.io/cran/R.utils/man/getHostname.System.html
That is close to what is done in getHostname, see https://github.com/HenrikBengtsson/R.utils/blob/develop/R/System.R#L51