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Published 20 hours ago • verified publisher icon robinandeer

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Open moonso opened this issue 8 years ago • 4 comments

Creating this issue to gather similar issues in one. In general we need suggestions of how to pick these from the vcf, what are the common named keys, are they often in VEP/SnpEff etc.. Feel free to edit the comments for different categories Please help out!

moonso avatar Apr 06 '16 15:04 moonso

Inheritance

  • [ ] Omim inheritance(with link)

moonso avatar Apr 06 '16 15:04 moonso

Evolutionary constraint

  • [ ] PhyloP
  • [ ] GERP
  • [ ] PHAST

moonso avatar Apr 06 '16 15:04 moonso

Disease link

  • [ ] CLNSIG

moonso avatar Apr 06 '16 15:04 moonso

We are currently generating this list for cancer samples (individual patients and cohorts). Give us a few weeks to finalise.

ohofmann avatar Apr 07 '16 12:04 ohofmann