Robert Millikin

@ianhirsch added plots to MetaDraw in #1590 . still todo: - Fragment PPM errors are not read in correctly in MetaDraw, but Ian has created the plots for these. We...

Brainstorming for new metadraw 

We should investigate the feasibility of using HTML/web browser for this too, rather than OxyPlot. I'm guessing there are more tools for visualizing stuff in HTML but I'm also not...

http://www.instantclue.uni-koeln.de/download.html

MetaMorpheus doesn't report unidentified peaks, but you could try summing all of the quantified+identified peptide intensities and compare these numbers between your two searches. I assume the search with EDC...

quick guess but it could be that there were no mods observed

Hi Yishai, Normalization occurs on the peptide level, and then that indirectly carries through to the proteins. All of the bioreps are normalized to the first biorep of the first...

Hi @mvaudel , I've encountered this error before but haven't pinned it down. Are you able to share this data file with me and I'll check it out? Please email...

this is really cool, I'd love to see this in MM

Apologies for the late reply. There's no automatic option to start from a previous task, but you can use the `-o` flag to specify an output directory. For example you...