Ryan Ly

This issue is also blocking the allensdk from adopting hdmf>=3.5.0. https://github.com/AllenInstitute/AllenSDK/blob/master/allensdk/brain_observatory/nwb/nwb_api.py#L28 The cause is the change here https://github.com/hdmf-dev/hdmf/pull/811 where HDMF now closes the file when the IO object gets deleted...

I just want to add that I also have this issue with Python 3.10 and the latest version of datajoint 0.14.0.

Thanks for taking a look at this PR. This issue comes up in the Frank Lab often. Syntax, integration, and style checks pass. Thanks for the comprehensive developer documentation!

I encountered this last week when comparing suite2p and caiman support for NWB. Does it make sense for suite2p (and similar processing/analysis tools) to accept a non-NWB file and create...

Good point. I think we should prevent upload of such files to DANDI. @bendichter @oruebel what do you think?

Thanks @CodyCBakerPhD . I just learned that when we released NWB schema 2.6.0, we (I) forgot to change the version string from "2.6.0-alpha" to "2.6.0" in the `nwb.namespace.yaml` file. It...

Update: I am not going to get to this this week or month. If someone else wants to take a crack at it, please feel free.

@h-mayorquin Could you describe the use case further? I don't totally see the use of adding an ROI without any image mask, pixel mask, or voxel mask. Is the ROI...

I see - so the ROI is the entire image. I think that should be explicitly defined, and it is OK to have an `image_mask` with an array of equal...

Oh! I totally missed that. I think folding it into the linter would work great.