Leonid Rozenberg
Leonid Rozenberg
Example, PGV has read-size of 125, so maybe we'd want a `--split-by 75,50` argument.
But how do we specify the full set of values? File?
- [ ] `C*02:10:01:?` in 128964 at pos ~ 720
Probably more relevant when joining per-loci graphs.
The current algorithm special cases some checks in Merge_mas.known_splice_adjustments. We could potentially detect them instead with 1. Check if allele ends with 'N'. 2. See if the variant matches a...
At some point the `Tool` and `Machine` logic needs to be parameterized by operating system so that `linux` specific choices such as [this one](https://github.com/hammerlab/biokepi/blob/master/src/lib/tool_providers.ml#L99) are not necessary.
## Describe the bug Per the [int](https://yaml.org/type/int.html) and [float](https://yaml.org/type/float.html) specs, int and float values should ignore `_` to make them readable. Unfortunately the schema validator infers an incorrect type: ...
There are parts of the current build system where internal modules are exposed to the outside. We need to use module aliases to unify this distinction.