Richard Brown

One thing to note with the zipping/compression of the files. When I time profile training with datasets consisting of `.nii.gz`, the majority of the time is actually spent in the...

Hi @myron -- sorry I'm only seeing this now, it's a great idea. To your third bullet point, however, I've noticed that decompressing images is by far the slowest transform...

@diazandr3s Your first stage also uses segmentation rather than regression, right?

Hi @dongyang0122 are you saying you'd like a comparison between the inference of a single image versus the mode of multiple random instances computed with TTA?

Little bump on this.

Great, thanks!

Example of notebook with explicit for loop: https://github.com/Project-MONAI/Tutorials/blob/master/brats_segmentation_3d.ipynb Example of notebook with `SupervisedTrainer`: https://github.com/Project-MONAI/Tutorials/blob/master/models_ensemble.ipynb

Sorry, I don't know Conda and am not sure how you want me to debug this. Do you just want me to try and build locally with CMake 3.17 and...

Can you pick the compiler version that Conda uses? If you could just set it to an earlier version, this problem would go away, right?

when I run `clang --version`, I get: ``` Apple clang version 11.0.3 (clang-1103.0.32.59) Target: x86_64-apple-darwin19.4.0 Thread model: posix InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin ``` So it seems I'm using 11.0.3, not 9.0.1.