diversitree
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richfitz
diversitree: comparative phylogenetic analyses of diversification
Hi, I've seen in some papers plots of the model fits for quasse. In my analysis a hump shaped model with drift fit best. Do you know how I can...
``` docker pull ghcr.io/r-hub/containers/clang17 docker run -v ${PWD}:/src -it --rm ghcr.io/r-hub/containers/clang17 apt-get update && apt-get -y install gdb git libfftw3-dev libgsl-dev vim R -e 'options(repos = "https://cloud.r-project.org"); install.packages(c("Rcpp", "ape", "deSolve",...
The best fitting model in QuaSSE for my data is a modal model. However, this is an upside down bell curve where speciation rates are high at all values except...
Hi I can Install diversitree, I am always having the error /usr/bin/ld: /usr/local/lib/libfftw3.a(assert.o): relocation R_X86_64_PC32 against symbol `stdout@@GLIBC_2.2.5' can not be used when making a shared object; recompile with -fPIC...
What does this mean, and how can I get around it? Error in branches(y.in, len[i], pars, depth[i], i) : Actual negative D value detected -- calculation failure
Hi everyone! I am struggling with a constant problem with a csv extension while preparing data for MuSSE model analysis: have tried to do a bunch of stuff to fix...
Edit of the argnames of musse objects fails like below. > argnames(lik)[1]
Surprised that this is not tested, but it's a bug. ``` library(diversitree) pars
When a vector contains multiple species with the same name, diversitree uses only the first observation. The correct behavior should be to throw an error. I just corrected this in...
