Ruben Vorderman

Thanks for your reply! Unfortunately, I am in the same spot as far as priorities are concerned. It has no haste as well, given that going from xxh64 -> xxh3...

It gets worse ``` sftp -P 8022 [email protected]@localhost:/export/ftp/*/* ``` Will download everything uploaded by other users, even if [email protected] is purged (EDIT: and deleted)! I am affraid that it is...

I think it is a good addition, but very complex. What about just using ``` interpreter: python ``` Versions and such should be mediated by the container used right? If...

Isn't this already documented? ```WDL task a { command

Could you explain why the heredoc syntax would not work in this case? I am not in favour of adding extra syntax and complexity to WDL if there is not...

if .. then .. else is a very well-known paradigm in programming. Also it is human readable. So this not violate the goals of WDL and I am very much...

We already have a `read_json` call: https://github.com/openwdl/wdl/blob/main/versions/1.0/SPEC.md#mixed-read_jsonstringfile. It can be used to read in a struct. We do that for example here: https://github.com/biowdl/germline-DNA/blob/99903edd6b826392a5db0d80551dabd415d77095/germline.wdl#L76 In this particular case we wrote a...

> Why is it that a JSON is unambiguous about types, whereas a TSV with a header is not? I don't see a difference between those two. If the TSV...

> 1. Is this necessary? > > 2. How will this benefit the Engine implementors? > > 3. Where do we put test cases? > > 4. How many test...

I agree that implicit int -> string and string -> int typecasts should be forbidden. I am not so sure about the optional stuff. This is already explicit right? the...