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importing tmap in python causes core dump, x86-64 version on both mac and linux

Open drmatthewclark opened this issue 4 months ago • 0 comments

behaivior: - just import tmap to reproduce. using python3.6 for compatibility; it used to work.

(tmap) mclark@metzora:~$ python Python 3.6.13 |Anaconda, Inc.| (default, Jun 4 2021, 14:25:59) [GCC 7.5.0] on linux Type "help", "copyright", "credits" or "license" for more information.

import tmap Illegal instruction (core dumped)

OS

Linux metzora 6.11.4-101.fc39.x86_64 #1 SMP PREEMPT_DYNAMIC Sun Oct 20 15:02:40 UTC 2024 x86_64 GNU/Linux

environment:

Name Version Build Channel

_libgcc_mutex 0.1 main
_openmp_mutex 5.1 1_gnu
ca-certificates 2024.9.24 h06a4308_0
certifi 2021.5.30 py36h06a4308_0
ld_impl_linux-64 2.40 h12ee557_0
libffi 3.3 he6710b0_2
libgcc-ng 11.2.0 h1234567_1
libgomp 11.2.0 h1234567_1
libstdcxx-ng 11.2.0 h1234567_1
ncurses 6.4 h6a678d5_0
ogdf 1.2.0 h2bc3f7f_0 tmap openssl 1.1.1w h7f8727e_0
pip 21.2.2 py36h06a4308_0
python 3.6.13 h12debd9_1
readline 8.2 h5eee18b_0
setuptools 58.0.4 py36h06a4308_0
sqlite 3.45.3 h5eee18b_0
tk 8.6.14 h39e8969_0
tmap 1.0.6 py36h2bc3f7f_0 tmap wheel 0.37.1 pyhd3eb1b0_0
xz 5.4.6 h5eee18b_1
zlib 1.2.13 h5eee18b_1

stack trace - Module /home/mclark/.conda/envs/tmap/lib/python3.6/lib-dynload/readline.cpython-36m-x86_64-linux-gnu.so without build-id. Module /home/mclark/.conda/envs/tmap/lib/python3.6/lib-dynload/readline.cpython-36m-x86_64-linux-gnu.so Stack trace of thread 18585: #0 0x00007fbf6002339c n/a (/home/mclark/.conda/envs/tmap/lib/python3.6/site-packages/tmap.cpython-36m-x86_64-linux-gnu.so + 0x22339c) ELF object binary architecture: AMD x86-64 Oct 24 16:45:08 metzora (sd-parse-elf)[18588]: Could not parse number of program headers from core file: invalid Elf' handle Oct 24 16:45:08 metzora (sd-parse-elf)[18588]: Could not parse number of program headers from core file: invalid Elf' handle Oct 24 16:45:08 metzora (sd-parse-elf)[18588]: Could not parse number of program headers from core file: invalid Elf' handle Oct 24 16:45:08 metzora (sd-parse-elf)[18588]: Could not parse number of program headers from core file: invalid Elf' handle Oct 24 16:45:08 metzora (sd-parse-elf)[18588]: Could not parse number of program headers from core file: invalid `Elf' handle

on macos using the x86_64 ithas the same issue Python 3.6.13 |Anaconda, Inc.| (default, Feb 23 2021, 12:58:59) [GCC Clang 10.0.0 ] on darwin Type "help", "copyright", "credits" or "license" for more information.

import tmap zsh: illegal hardware instruction python

drmatthewclark avatar Oct 24 '24 21:10 drmatthewclark