poreCov
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[Question] CI for Variant Calling
Is your feature request related to a problem? Please describe. No problem here, just a question and an offer.
Describe the solution you'd like I am currently developing a framework for continuous integration and evaluation of small variant calling. I read the GH Actions of poreCov and saw that the current tests are running dry runs testing principal functionality. What I offer is to write a GH Action to benchmark the variant calling (precision/recall/F1-score on synthetic data). Is that generally in your interest or beneficial? Are you already running such tests locally or otherwise outside of GH Actions?