fastai_scans
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FileNotFoundError: [Errno 2] No such file or directory: '/content/nifti/meta/sizes'
Hii, I am new to NIFTI images, FOund your repository very useful and interesting. and was using your repoistory, but got following error
i used following code
data = (fastai_scans.VolumeItemList.from_paths(path/'nifti', path/'nifti/labels.csv')
.split_by_rand_pct(0.2, seed=7)
.label_from_metadata('')
.transform(fastai_scans.get_transforms())
.databunch(bs=bs)
.normalize())
And i am Getting error -
FileNotFoundError Traceback (most recent call last)
<ipython-input-91-2e1bfe6fc602> in <module>()
----> 1 data = fastai_scans.VolumeItemList.from_paths(path/'nifti', path/'nifti/labels.csv')
1 frames
/usr/local/lib/python3.6/dist-packages/bcolz/toplevel.py in open(rootdir, mode)
138 return bcolz.ctable(rootdir=rootdir, mode=mode)
139 else:
--> 140 return bcolz.carray(rootdir=rootdir, mode=mode)
bcolz/carray_ext.pyx in bcolz.carray_ext.carray.__cinit__()
bcolz/carray_ext.pyx in bcolz.carray_ext.carray._read_meta()
FileNotFoundError: [Errno 2] No such file or directory: '/content/nifti/meta/sizes'
Please help, Thanks in advance.
I am not using BraTs challenge dataset. I have my own NIFTI data files.