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Published 20 hours ago • verified publisher icon ren-lab

benchmark the bwa alignment step.

Open shawnzhangyx opened this issue 7 years ago • 0 comments

  • Check the performance/speed of
  1. alignment
  2. filter_chimeric
  3. mkPE
  4. sorting. See which is the rate limiting step. Is there need to separate the pipe into temp files to avoid "broken Pipe"?

shawnzhangyx avatar May 24 '17 20:05 shawnzhangyx