heatmap-scatter-dash

heatmap-scatter-dash copied to clipboard

These stack traces show up during the test run: The tests still pass, but the noise is distracting: ``` test_bad_config_html_error_true (tests.test_app_runner.TestAppRunner) ... /Users/chuck/github/refinery-platform/heatmap-scatter-dash/context/app_runner.py:114: UserWarning: Traceback (most recent call last): File...

mccalluc

Pasted ~50 gene IDs into search box, but the Heatmap and Sample-by-Sample plots never updated.

gmnelson

Label condition dots

2

There's plenty of room... let's just have the points of the conditions scatterplot labelled by default: Hover shouldn't be required.

mccalluc

From Geoff: > For *Sample-by-Sample*, can we calculate a correlation coefficient between the displayed conditions and show that somewhere on the plot? Maybe on a line below?

mccalluc

mccalluc

From geoff: > When plotting large data from Shannan (normalized_counts.csv, expt_vs_control_de.csv): > - I searched for a gene (ENSMUSG00000000037) in the search box below the Heatmap > - The Heatmap...

mccalluc

... and have that update scatterplots

mccalluc

faster text search

2

with 10K strings to search, the inefficiency of the linear search starts to become apparent. Is there a python package that will give us simple in memory substring searches?

mccalluc

Plotly modebar overlaps pulldown

2

The modebar which shows up on hover has a higher z-index than the pulldowns... Maybe up the z index of the pulldown?

mccalluc

mccalluc