marcin p. joachimiak
marcin p. joachimiak
The two data sources are: 1. https://github.com/beoutbreakprepared/nCoV2019/tree/master/latest_data 2. https://docs.google.com/spreadsheets/d/e/2PACX-1vQU0SIALScXx8VXDX7yKNKWWPKE1YjFlWc6VTEVSN45CklWWf-uWmprQIyLtoPDA18tX9cFDr-aQ9S6/pubhtml For 1. - The 'symptoms' column needs to be mapped to HPO terms as possible. - The 'chronic_disease_binary,chronic_disease' disease columns need...
This is in theory a subset of PubChem and ChEMBL and we can discuss whether a subset or more is worth it. This is also to support a request by...
http://ctdbase.org/ **Name of the dataset** A clear and concise description of the dataset and where you can download it from. **Mapping or relevant fields** A clear and concise description of...
https://open.fda.gov/data/faers/ **Name of the dataset** A clear and concise description of the dataset and where you can download it from. **Mapping or relevant fields** A clear and concise description of...
from cell preprint -- hopefully its just a well organized table in the full publication https://www.cell.com/pb-assets/products/coronavirus/CELL_CELL-D-20-00765.pdf **Name of the dataset** A clear and concise description of the dataset and where...
Ontobiotope is an ontology from AgroPortal that models knowledge about microbial habitats and traits. See here: https://agroportal.lirmm.fr/ontologies/ONTOBIOTOPE
Embeddings were successfully generated with Node2VecSkipGramEnsmallen from GRAPE. However, when trying to visualize the graph dimensionality reduction only the node degree plot showed in the top left, the other plots...
Support for these file formats: - OWL files - OBO files @cmungall did you have anything else in mind?
When these two keys are missing in the yaml: pos_validation neg_validation Then get the following error: can't find key in YAML: 'pos_validation' can't find key in YAML: 'neg_validation' Traceback (most...
This overlaps with Melissa's suggestion and would be useful for Translator work.