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Filling in empty slices

Open junxiant opened this issue 1 year ago • 0 comments

Hello, I am converting a DICOM Seg file, which contains no empty slices (No mask annotations). After I have converted it into nifti format, I got a segmentation mask which works exactly, except the missing slices are not included.

Is there a way to include these empty slices with reference to the original DICOM scan?

Or will i need to

  1. Write these SEG into dicom files
  2. Match these SEG's referenced_instance_uid to the original scan's SOPInstanceUID, and create empty slices in between?

junxiant avatar Jul 17 '23 07:07 junxiant