ValueError: The first guess on the deviance function returned a nan. This could be a boundary problem and should be reported.

[OnkarMulay]

• spladder version: The one previous to latest
• Python version: compatible with spladder version
• Operating System: Linux

Description

Running spladder in test mode. New version gives index error so tried with previous version

What I Did

Code: #!/bin/tcsh #PBS -l walltime=12:00:00 #PBS -q normal #PBS -l jobfs=1gb #PBS -l mem=64gb #PBS -l ncpus=32 #PBS -P zq45 conda activate /scratch/miniconda3/envs/Spladder

spladder test --conditionA /scratch/Spladder/Code/MixA.txt --conditionB /scratch/Spladder/Code/MixB.txt -v --outdir /scratch/Spladder/Outputs

Error: ValueError: The first guess on the deviance function returned a nan. This could be a boundary problem and should be reported.

Reported only skipped exon events