pancanatlas_code_public

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Hi, I'm trying to run the code about alt_splice part. But some error feedback printed out. The script told me that it don't exist utils.paths module in environment. Was the...

BioXRay

Hi, I am trying to run the compute_peptide_lists.py script under the peptide generation directory. The germline mutations file the script takes in is in the hdf5 format. Since I had...

varsha090597

Missing python libraries

5

Hello, Now that I made spladder work, I am trying to run some analysis from these codes. I want to compare tumour and normal data to find cancer specific events....

paulinefx

how can I get annotated events?

1

hello, Thank you for your detailed codes. However I got a question. I'd like to know if I can directly get which alternative splicing event is annotated in the gtf...

mhjiang97