cugraph
cugraph copied to clipboard
Published
20 hours ago •
rapidsai
rapidsai
[BUG]: Module 'cugraph_pyg' not found.
Version
24.02.00
Which installation method(s) does this occur on?
No response
Describe the bug.
After I build cugraph from source, I go to the directory "cugraph/python/" and run "pytest". But I got some errors, it seems there is something wrong with my cugraph_pyg.
Minimum reproducible example
cd cugraph/python
pytest
### Relevant log output
```shell
platform linux -- Python 3.10.13, pytest-8.0.0, pluggy-1.4.0
benchmark: 4.0.0 (defaults: timer=time.perf_counter disable_gc=False min_rounds=5 min_time=0.000005 max_time=1.0 calibration_precision=10 warmup=False warmup_iterations=100000)
Matplotlib: 3.8.2
Freetype: 2.12.1
rootdir: /home/xxx/Documents/cugraph/python
plugins: xdist-3.5.0, cov-4.1.0, anyio-4.2.0, benchmark-4.0.0, mpl-0.16.1
collected 7197 items / 24 errors
================================================================================================== ERRORS ==================================================================================================
_______________________________________________________________ ERROR collecting cugraph-pyg/cugraph_pyg/tests/mg/test_mg_cugraph_loader.py ________________________________________________________________
ImportError while importing test module '/home/xxx/Documents/cugraph/python/cugraph-pyg/cugraph_pyg/tests/mg/test_mg_cugraph_loader.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
../../../anaconda3/envs/cugraph_dev/lib/python3.10/importlib/__init__.py:126: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
cugraph-pyg/cugraph_pyg/tests/mg/test_mg_cugraph_loader.py:16: in <module>
from cugraph_pyg.loader import CuGraphNeighborLoader
E ModuleNotFoundError: No module named 'cugraph_pyg'
_______________________________________________________________ ERROR collecting cugraph-pyg/cugraph_pyg/tests/mg/test_mg_cugraph_sampler.py _______________________________________________________________
ImportError while importing test module '/home/xxx/Documents/cugraph/python/cugraph-pyg/cugraph_pyg/tests/mg/test_mg_cugraph_sampler.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
../../../anaconda3/envs/cugraph_dev/lib/python3.10/importlib/__init__.py:126: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
cugraph-pyg/cugraph_pyg/tests/mg/test_mg_cugraph_sampler.py:19: in <module>
from cugraph_pyg.data import CuGraphStore
E ModuleNotFoundError: No module named 'cugraph_pyg'
________________________________________________________________ ERROR collecting cugraph-pyg/cugraph_pyg/tests/mg/test_mg_cugraph_store.py ________________________________________________________________
ImportError while importing test module '/home/xxx/Documents/cugraph/python/cugraph-pyg/cugraph_pyg/tests/mg/test_mg_cugraph_store.py'.
Hint: make sure your test modules/packages have valid Python names.
Traceback:
../../../anaconda3/envs/cugraph_dev/lib/python3.10/importlib/__init__.py:126: in import_module
return _bootstrap._gcd_import(name[level:], package, level)
cugraph-pyg/cugraph_pyg/tests/mg/test_mg_cugraph_store.py:15: in <module>
from cugraph_pyg.data.cugraph_store import (
E ModuleNotFoundError: No module named 'cugraph_pyg'
../../../anaconda3/envs/cugraph_dev/lib/python3.10/site-packages/_pytest/config/__init__.py:654: in _importconftest
mod = import_path(conftestpath, mode=importmode, root=rootpath)
../../../anaconda3/envs/cugraph_dev/lib/python3.10/site-packages/_pytest/pathlib.py:590: in import_path
raise ImportPathMismatchError(module_name, module_file, path)
E _pytest.pathlib.ImportPathMismatchError: ('tests.conftest', '/home/xxx/Documents/cugraph/python/cugraph-dgl/tests/conftest.py', PosixPath('/home/xxx/Documents/cugraph/python/cugraph-service/tests/conftest.py'))
______________________________________________________________________ ERROR collecting pylibcugraph/pylibcugraph/tests/test_utils.py ______________________________________________________________________
import file mismatch:
imported module 'test_utils' has this __file__ attribute:
/home/xxx/Documents/cugraph/python/cugraph/cugraph/tests/utils/test_utils.py
which is not the same as the test file we want to collect:
/home/xxx/Documents/cugraph/python/pylibcugraph/pylibcugraph/tests/test_utils.py
HINT: remove __pycache__ / .pyc files and/or use a unique basename for your test file modules
Environment details
<details><summary>Click here to see environment details</summary><pre>
**git***
commit ff76a385c4048ac75d1408c3bcf9d4e3018a88b0 (HEAD -> branch-24.02)
Author: Seunghwa Kang <[email protected]>
Date: Thu Jan 25 13:13:58 2024 -0800
Update per_v_transform_reduce_incoming|outgoing_e to support edge masking (#4085)
per_v_transform_reduce_(incoming|outgoing_e) now supports edge masking.
Authors:
- Seunghwa Kang (https://github.com/seunghwak)
Approvers:
- Chuck Hastings (https://github.com/ChuckHastings)
- Naim (https://github.com/naimnv)
- Joseph Nke (https://github.com/jnke2016)
URL: https://github.com/rapidsai/cugraph/pull/4085
**git submodules***
***OS Information***
DISTRIB_ID=Kylin
DISTRIB_RELEASE=V10
DISTRIB_CODENAME=kylin
DISTRIB_DESCRIPTION="Kylin V10 SP1"
DISTRIB_KYLIN_RELEASE=V10
DISTRIB_VERSION_TYPE=enterprise
DISTRIB_VERSION_MODE=normal
NAME="Ubuntu"
VERSION="18.04.6 LTS (Bionic Beaver)"
ID=ubuntu
ID_LIKE=debian
PRETTY_NAME="Ubuntu 18.04.6 LTS"
VERSION_ID="18.04"
HOME_URL="https://www.ubuntu.com/"
SUPPORT_URL="https://help.ubuntu.com/"
BUG_REPORT_URL="https://bugs.launchpad.net/ubuntu/"
PRIVACY_POLICY_URL="https://www.ubuntu.com/legal/terms-and-policies/privacy-policy"
VERSION_CODENAME=bionic
UBUNTU_CODENAME=bionic
Linux m10 4.15.0-39-generic #42-Ubuntu SMP Tue Oct 23 15:48:01 UTC 2018 x86_64 x86_64 x86_64 GNU/Linux
***GPU Information***
Wed Jan 31 14:08:24 2024
+-----------------------------------------------------------------------------+
| NVIDIA-SMI 520.61.05 Driver Version: 520.61.05 CUDA Version: 11.8 |
|-------------------------------+----------------------+----------------------+
| GPU Name Persistence-M| Bus-Id Disp.A | Volatile Uncorr. ECC |
| Fan Temp Perf Pwr:Usage/Cap| Memory-Usage | GPU-Util Compute M. |
| | | MIG M. |
|===============================+======================+======================|
| 0 Quadro P400 On | 00000000:17:00.0 On | N/A |
| 38% 51C P0 N/A / N/A | 499MiB / 2048MiB | 4% Default |
| | | N/A |
+-------------------------------+----------------------+----------------------+
| 1 NVIDIA GeForce ... On | 00000000:65:00.0 Off | N/A |
| 31% 43C P8 27W / 250W | 1MiB / 11264MiB | 0% Default |
| | | N/A |
+-------------------------------+----------------------+----------------------+
| 2 NVIDIA GeForce ... On | 00000000:B3:00.0 Off | N/A |
| 31% 38C P8 21W / 250W | 1MiB / 11264MiB | 0% Default |
| | | N/A |
+-------------------------------+----------------------+----------------------+
+-----------------------------------------------------------------------------+
| Processes: |
| GPU GI CI PID Type Process name GPU Memory |
| ID ID Usage |
|=============================================================================|
| 0 N/A N/A 1410 G /usr/lib/xorg/Xorg 39MiB |
| 0 N/A N/A 1604 G /usr/bin/gnome-shell 71MiB |
| 0 N/A N/A 2264 G /usr/lib/xorg/Xorg 186MiB |
| 0 N/A N/A 2378 G /usr/bin/gnome-shell 56MiB |
| 0 N/A N/A 14066 G ...RendererForSitePerProcess 61MiB |
| 0 N/A N/A 31834 G ...223421608301574386,262144 78MiB |
+-----------------------------------------------------------------------------+
***CPU***
Architecture: x86_64
CPU op-mode(s): 32-bit, 64-bit
Byte Order: Little Endian
CPU(s): 12
On-line CPU(s) list: 0-11
Thread(s) per core: 2
Core(s) per socket: 6
Socket(s): 1
NUMA node(s): 1
Vendor ID: GenuineIntel
CPU family: 6
Model: 85
Model name: Intel(R) Xeon(R) W-2133 CPU @ 3.60GHz
Stepping: 4
CPU MHz: 1200.039
CPU max MHz: 3900.0000
CPU min MHz: 1200.0000
BogoMIPS: 7200.00
Virtualization: VT-x
L1d cache: 32K
L1i cache: 32K
L2 cache: 1024K
L3 cache: 8448K
NUMA node0 CPU(s): 0-11
Flags: fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc art arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc cpuid aperfmperf pni pclmulqdq dtes64 monitor ds_cpl vmx smx est tm2 ssse3 sdbg fma cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm abm 3dnowprefetch cpuid_fault epb cat_l3 cdp_l3 invpcid_single pti intel_ppin ssbd mba ibrs ibpb stibp tpr_shadow vnmi flexpriority ept vpid fsgsbase tsc_adjust bmi1 hle avx2 smep bmi2 erms invpcid rtm cqm mpx rdt_a avx512f avx512dq rdseed adx smap clflushopt clwb intel_pt avx512cd avx512bw avx512vl xsaveopt xsavec xgetbv1 xsaves cqm_llc cqm_occup_llc cqm_mbm_total cqm_mbm_local dtherm ida arat pln pts hwp hwp_act_window hwp_epp hwp_pkg_req flush_l1d arch_capabilities
***CMake***
/home/xxx/anaconda3/envs/cugraph_dev/bin/cmake
cmake version 3.28.1
CMake suite maintained and supported by Kitware (kitware.com/cmake).
***g++***
/home/xxx/anaconda3/envs/cugraph_dev/bin/g++
g++ (conda-forge gcc 11.4.0-4) 11.4.0
Copyright (C) 2021 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
***nvcc***
/home/xxx/anaconda3/envs/cugraph_dev/bin/nvcc
nvcc: NVIDIA (R) Cuda compiler driver
Copyright (c) 2005-2022 NVIDIA Corporation
Built on Wed_Sep_21_10:33:58_PDT_2022
Cuda compilation tools, release 11.8, V11.8.89
Build cuda_11.8.r11.8/compiler.31833905_0
***Python***
/home/xxx/anaconda3/envs/cugraph_dev/bin/python
Python 3.10.13
***Environment Variables***
PATH : /home/xxx/anaconda3/envs/cugraph_dev/bin:/home/xxx/anaconda3/condabin:/home/xxx/anaconda3/bin:/home/xxx/.local/bin:/home/xxx/Documents/cub:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/usr/local/cuda/bin
LD_LIBRARY_PATH :
NUMBAPRO_NVVM :
NUMBAPRO_LIBDEVICE :
CONDA_PREFIX : /home/xxx/anaconda3/envs/cugraph_dev
PYTHON_PATH :
***conda packages***
/home/xxx/anaconda3/condabin/conda
# packages in environment at /home/xxx/anaconda3/envs/cugraph_dev:
#
# Name Version Build Channel
_libgcc_mutex 0.1 conda_forge conda-forge
_openmp_mutex 4.5 2_gnu conda-forge
_sysroot_linux-64_curr_repodata_hack 3 h69a702a_13 conda-forge
accessible-pygments 0.0.4 pyhd8ed1ab_0 conda-forge
aiohttp 3.9.1 py310h2372a71_0 conda-forge
aiosignal 1.3.1 pyhd8ed1ab_0 conda-forge
alabaster 0.7.16 pyhd8ed1ab_0 conda-forge
annotated-types 0.6.0 pypi_0 pypi
anyio 4.2.0 pyhd8ed1ab_0 conda-forge
argon2-cffi 23.1.0 pyhd8ed1ab_0 conda-forge
argon2-cffi-bindings 21.2.0 py310h2372a71_4 conda-forge
arrow 1.3.0 pyhd8ed1ab_0 conda-forge
asttokens 2.4.1 pyhd8ed1ab_0 conda-forge
async-lru 2.0.4 pyhd8ed1ab_0 conda-forge
async-timeout 4.0.3 pyhd8ed1ab_0 conda-forge
atk-1.0 2.38.0 hd4edc92_1 conda-forge
attrs 23.2.0 pyh71513ae_0 conda-forge
autopep8 2.0.4 pypi_0 pypi
aws-c-auth 0.7.11 h0b4cabd_1 conda-forge
aws-c-cal 0.6.9 h14ec70c_3 conda-forge
aws-c-common 0.9.12 hd590300_0 conda-forge
aws-c-compression 0.2.17 h572eabf_8 conda-forge
aws-c-event-stream 0.4.1 h97bb272_2 conda-forge
aws-c-http 0.8.0 h9129f04_2 conda-forge
aws-c-io 0.14.0 hf8f278a_1 conda-forge
aws-c-mqtt 0.10.1 h2b97f5f_0 conda-forge
aws-c-s3 0.4.9 hca09fc5_0 conda-forge
aws-c-sdkutils 0.1.13 h572eabf_1 conda-forge
aws-checksums 0.1.17 h572eabf_7 conda-forge
aws-crt-cpp 0.26.0 h04327c0_8 conda-forge
aws-sdk-cpp 1.11.210 hba3e011_10 conda-forge
babel 2.14.0 pyhd8ed1ab_0 conda-forge
beautifulsoup4 4.12.3 pyha770c72_0 conda-forge
binutils 2.40 hdd6e379_0 conda-forge
binutils_impl_linux-64 2.40 hf600244_0 conda-forge
binutils_linux-64 2.40 hbdbef99_2 conda-forge
bleach 6.1.0 pyhd8ed1ab_0 conda-forge
bokeh 3.3.4 pyhd8ed1ab_0 conda-forge
breathe 4.35.0 pyhd8ed1ab_1 conda-forge
brotli 1.1.0 hd590300_1 conda-forge
brotli-bin 1.1.0 hd590300_1 conda-forge
brotli-python 1.1.0 py310hc6cd4ac_1 conda-forge
bzip2 1.0.8 hd590300_5 conda-forge
c-ares 1.26.0 hd590300_0 conda-forge
c-compiler 1.5.2 h0b41bf4_0 conda-forge
ca-certificates 2023.12.12 h06a4308_0
cached-property 1.5.2 hd8ed1ab_1 conda-forge
cached_property 1.5.2 pyha770c72_1 conda-forge
cachetools 5.3.2 pyhd8ed1ab_0 conda-forge
cairo 1.18.0 h3faef2a_0 conda-forge
certifi 2023.11.17 py310h06a4308_0
cffi 1.16.0 py310h2fee648_0 conda-forge
cfgv 3.3.1 pyhd8ed1ab_0 conda-forge
charset-normalizer 3.3.2 pyhd8ed1ab_0 conda-forge
click 8.1.7 unix_pyh707e725_0 conda-forge
cloudpickle 3.0.0 pyhd8ed1ab_0 conda-forge
cmake 3.28.1 hcfe8598_0 conda-forge
colorama 0.4.6 pyhd8ed1ab_0 conda-forge
comm 0.2.1 pyhd8ed1ab_0 conda-forge
commonmark 0.9.1 py_0 conda-forge
contourpy 1.2.0 py310hd41b1e2_0 conda-forge
coverage 7.4.1 py310h2372a71_0 conda-forge
cubinlinker 0.3.0 py310hfdf336d_0 rapidsai
cuda-profiler-api 11.8.86 0 nvidia
cuda-python 11.8.3 py310h70a93da_0 conda-forge
cuda-version 11.8 h70ddcb2_2 conda-forge
cudatoolkit 11.8.0 h4ba93d1_12 conda-forge
cudf 24.02.00a240 cuda11_py310_240128_g821f4dea10_240 rapidsai-nightly
cugraph 24.2.0 pypi_0 pypi
cupy 13.0.0 py310h189a05f_1 conda-forge
cupy-core 13.0.0 py310h506062a_1 conda-forge
cxx-compiler 1.5.2 hf52228f_0 conda-forge
cycler 0.12.1 pyhd8ed1ab_0 conda-forge
cython 3.0.8 py310hc6cd4ac_0 conda-forge
cytoolz 0.12.2 py310h2372a71_1 conda-forge
dask 2024.1.1 pyhd8ed1ab_0 conda-forge
dask-core 2024.1.2a240126 py_gb1909c771_0 dask/label/dev
dask-cuda 24.02.00a28 py310_240129_g34e7404_28 rapidsai-nightly
dask-cudf 24.02.00a240 cuda11_py310_240128_g821f4dea10_240 rapidsai-nightly
debugpy 1.8.0 py310hc6cd4ac_1 conda-forge
decorator 5.1.1 pyhd8ed1ab_0 conda-forge
defusedxml 0.7.1 pyhd8ed1ab_0 conda-forge
dgl 2.0.0+cu118 pypi_0 pypi
dglgo 0.0.2 pypi_0 pypi
distlib 0.3.8 pyhd8ed1ab_0 conda-forge
distributed 2024.1.1 pyhd8ed1ab_0 conda-forge
dlpack 0.5 h9c3ff4c_0 conda-forge
docutils 0.19 py310hff52083_1 conda-forge
doxygen 1.10.0 h661eb56_0 conda-forge
entrypoints 0.4 pyhd8ed1ab_0 conda-forge
exceptiongroup 1.2.0 pyhd8ed1ab_2 conda-forge
execnet 2.0.2 pyhd8ed1ab_0 conda-forge
executing 2.0.1 pyhd8ed1ab_0 conda-forge
expat 2.5.0 hcb278e6_1 conda-forge
fastrlock 0.8.2 py310hc6cd4ac_2 conda-forge
filelock 3.13.1 pyhd8ed1ab_0 conda-forge
fmt 10.2.1 h00ab1b0_0 conda-forge
font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge
font-ttf-inconsolata 3.000 h77eed37_0 conda-forge
font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge
font-ttf-ubuntu 0.83 h77eed37_1 conda-forge
fontconfig 2.14.2 h14ed4e7_0 conda-forge
fonts-conda-ecosystem 1 0 conda-forge
fonts-conda-forge 1 0 conda-forge
fonttools 4.47.2 py310h2372a71_0 conda-forge
fqdn 1.5.1 pyhd8ed1ab_0 conda-forge
freetype 2.12.1 h267a509_2 conda-forge
fribidi 1.0.10 h36c2ea0_0 conda-forge
frozenlist 1.4.1 py310h2372a71_0 conda-forge
fsspec 2023.12.2 pyhca7485f_0 conda-forge
future 0.18.3 pyhd8ed1ab_0 conda-forge
gcc 11.4.0 h7baecda_2 conda-forge
gcc_impl_linux-64 11.4.0 h7aa1c59_4 conda-forge
gcc_linux-64 11.4.0 hfd045f2_2 conda-forge
gdk-pixbuf 2.42.10 h829c605_4 conda-forge
gettext 0.21.1 h27087fc_0 conda-forge
gflags 2.2.2 he1b5a44_1004 conda-forge
giflib 5.2.1 h0b41bf4_3 conda-forge
glog 0.6.0 h6f12383_0 conda-forge
gmock 1.14.0 ha770c72_1 conda-forge
gmp 6.3.0 h59595ed_0 conda-forge
graphite2 1.3.13 h58526e2_1001 conda-forge
graphviz 9.0.0 h78e8752_1 conda-forge
gtest 1.14.0 h00ab1b0_1 conda-forge
gtk2 2.24.33 h7f000aa_3 conda-forge
gts 0.7.6 h977cf35_4 conda-forge
gxx 11.4.0 h7baecda_2 conda-forge
gxx_impl_linux-64 11.4.0 h7aa1c59_4 conda-forge
gxx_linux-64 11.4.0 hfc1ae95_2 conda-forge
harfbuzz 8.3.0 h3d44ed6_0 conda-forge
icu 73.2 h59595ed_0 conda-forge
identify 2.5.33 pyhd8ed1ab_0 conda-forge
idna 3.6 pyhd8ed1ab_0 conda-forge
imagesize 1.4.1 pyhd8ed1ab_0 conda-forge
importlib-metadata 7.0.1 pyha770c72_0 conda-forge
importlib-resources 6.1.1 pyhd8ed1ab_0 conda-forge
importlib_metadata 7.0.1 hd8ed1ab_0 conda-forge
importlib_resources 6.1.1 pyhd8ed1ab_0 conda-forge
iniconfig 2.0.0 pyhd8ed1ab_0 conda-forge
ipykernel 6.29.0 pyhd33586a_0 conda-forge
ipython 8.20.0 pyh707e725_0 conda-forge
isoduration 20.11.0 pyhd8ed1ab_0 conda-forge
isort 5.13.2 pypi_0 pypi
jedi 0.19.1 pyhd8ed1ab_0 conda-forge
jinja2 3.1.3 pyhd8ed1ab_0 conda-forge
joblib 1.3.2 pyhd8ed1ab_0 conda-forge
json5 0.9.14 pyhd8ed1ab_0 conda-forge
jsonpointer 2.4 py310hff52083_3 conda-forge
jsonschema 4.21.1 pyhd8ed1ab_0 conda-forge
jsonschema-specifications 2023.12.1 pyhd8ed1ab_0 conda-forge
jsonschema-with-format-nongpl 4.21.1 pyhd8ed1ab_0 conda-forge
jupyter-lsp 2.2.2 pyhd8ed1ab_0 conda-forge
jupyter_client 8.6.0 pyhd8ed1ab_0 conda-forge
jupyter_core 5.7.1 py310hff52083_0 conda-forge
jupyter_events 0.9.0 pyhd8ed1ab_0 conda-forge
jupyter_server 2.12.5 pyhd8ed1ab_0 conda-forge
jupyter_server_terminals 0.5.2 pyhd8ed1ab_0 conda-forge
jupyterlab 4.0.11 pyhd8ed1ab_0 conda-forge
jupyterlab_pygments 0.3.0 pyhd8ed1ab_0 conda-forge
jupyterlab_server 2.25.2 pyhd8ed1ab_0 conda-forge
kernel-headers_linux-64 3.10.0 h4a8ded7_13 conda-forge
keyutils 1.6.1 h166bdaf_0 conda-forge
kiwisolver 1.4.5 py310hd41b1e2_1 conda-forge
krb5 1.21.2 h659d440_0 conda-forge
lcms2 2.16 hb7c19ff_0 conda-forge
ld_impl_linux-64 2.40 h41732ed_0 conda-forge
lerc 4.0.0 h27087fc_0 conda-forge
libabseil 20230802.1 cxx17_h59595ed_0 conda-forge
libarrow 14.0.2 h84dd17c_2_cpu conda-forge
libarrow-acero 14.0.2 h59595ed_2_cpu conda-forge
libarrow-dataset 14.0.2 h59595ed_2_cpu conda-forge
libarrow-flight 14.0.2 h120cb0d_2_cpu conda-forge
libarrow-flight-sql 14.0.2 h61ff412_2_cpu conda-forge
libarrow-gandiva 14.0.2 hacb8726_2_cpu conda-forge
libarrow-substrait 14.0.2 h61ff412_2_cpu conda-forge
libblas 3.9.0 21_linux64_openblas conda-forge
libbrotlicommon 1.1.0 hd590300_1 conda-forge
libbrotlidec 1.1.0 hd590300_1 conda-forge
libbrotlienc 1.1.0 hd590300_1 conda-forge
libcblas 3.9.0 21_linux64_openblas conda-forge
libcrc32c 1.1.2 h9c3ff4c_0 conda-forge
libcublas 11.11.3.6 0 nvidia
libcublas-dev 11.11.3.6 0 nvidia
libcudf 24.02.00a240 cuda11_240128_g821f4dea10_240 rapidsai-nightly
libcufile 1.4.0.31 0 nvidia
libcufile-dev 1.4.0.31 0 nvidia
libcugraphops 24.02.00a13 cuda11_240128_g2fd694cd_13 rapidsai-nightly
libcurand 10.3.0.86 0 nvidia
libcurand-dev 10.3.0.86 0 nvidia
libcurl 8.5.0 hca28451_0 conda-forge
libcusolver 11.4.1.48 0 nvidia
libcusolver-dev 11.4.1.48 0 nvidia
libcusparse 11.7.5.86 0 nvidia
libcusparse-dev 11.7.5.86 0 nvidia
libdeflate 1.19 hd590300_0 conda-forge
libedit 3.1.20191231 he28a2e2_2 conda-forge
libev 4.33 hd590300_2 conda-forge
libevent 2.1.12 hf998b51_1 conda-forge
libexpat 2.5.0 hcb278e6_1 conda-forge
libffi 3.4.2 h7f98852_5 conda-forge
libgcc-devel_linux-64 11.4.0 h922705a_104 conda-forge
libgcc-ng 13.2.0 h807b86a_4 conda-forge
libgd 2.3.3 h119a65a_9 conda-forge
libgfortran-ng 13.2.0 h69a702a_4 conda-forge
libgfortran5 13.2.0 ha4646dd_4 conda-forge
libglib 2.78.3 h783c2da_0 conda-forge
libgomp 13.2.0 h807b86a_4 conda-forge
libgoogle-cloud 2.12.0 h5206363_4 conda-forge
libgrpc 1.59.3 hd6c4280_0 conda-forge
libhwloc 2.9.3 default_h554bfaf_1009 conda-forge
libiconv 1.17 hd590300_2 conda-forge
libidn2 2.3.7 hd590300_0 conda-forge
libjpeg-turbo 3.0.0 hd590300_1 conda-forge
libkvikio 24.02.00a cuda11_240128_gf8f5858_16 rapidsai-nightly
liblapack 3.9.0 21_linux64_openblas conda-forge
libllvm14 14.0.6 hcd5def8_4 conda-forge
libllvm15 15.0.7 hb3ce162_4 conda-forge
libnghttp2 1.58.0 h47da74e_1 conda-forge
libnl 3.9.0 hd590300_0 conda-forge
libnsl 2.0.1 hd590300_0 conda-forge
libnuma 2.0.16 h0b41bf4_1 conda-forge
libopenblas 0.3.26 pthreads_h413a1c8_0 conda-forge
libparquet 14.0.2 h352af49_2_cpu conda-forge
libpng 1.6.39 h753d276_0 conda-forge
libprotobuf 4.24.4 hf27288f_0 conda-forge
libraft 24.02.00a85 cuda11_240128_g2822532f_85 rapidsai-nightly
libraft-headers 24.02.00a85 cuda11_240128_g2822532f_85 rapidsai-nightly
libraft-headers-only 24.02.00a85 cuda11_240128_g2822532f_85 rapidsai-nightly
libre2-11 2023.06.02 h7a70373_0 conda-forge
librmm 24.02.00a36 cuda11_240129_g6c904f7b_36 rapidsai-nightly
librsvg 2.56.3 he3f83f7_1 conda-forge
libsanitizer 11.4.0 h4dcbe23_4 conda-forge
libsodium 1.0.18 h36c2ea0_1 conda-forge
libsqlite 3.44.2 h2797004_0 conda-forge
libssh2 1.11.0 h0841786_0 conda-forge
libstdcxx-devel_linux-64 11.4.0 h922705a_104 conda-forge
libstdcxx-ng 13.2.0 h7e041cc_4 conda-forge
libthrift 0.19.0 hb90f79a_1 conda-forge
libtiff 4.6.0 ha9c0a0a_2 conda-forge
libunistring 0.9.10 h7f98852_0 conda-forge
libutf8proc 2.8.0 h166bdaf_0 conda-forge
libuuid 2.38.1 h0b41bf4_0 conda-forge
libuv 1.46.0 hd590300_0 conda-forge
libwebp 1.3.2 h658648e_1 conda-forge
libwebp-base 1.3.2 hd590300_0 conda-forge
libwholegraph 24.02.00a28 cuda11_240128_g8cb7c5c_28 rapidsai-nightly
libxcb 1.15 h0b41bf4_0 conda-forge
libxcrypt 4.4.36 hd590300_1 conda-forge
libxml2 2.12.4 h232c23b_1 conda-forge
libzlib 1.2.13 hd590300_5 conda-forge
littleutils 0.2.2 pypi_0 pypi
llvmlite 0.40.1 py310h1b8f574_0 conda-forge
locket 1.0.0 pyhd8ed1ab_0 conda-forge
lz4 4.3.3 py310h350c4a5_0 conda-forge
lz4-c 1.9.4 hcb278e6_0 conda-forge
markdown 3.5.2 pyhd8ed1ab_0 conda-forge
markdown-it-py 3.0.0 pyhd8ed1ab_0 conda-forge
markupsafe 2.1.4 py310h2372a71_0 conda-forge
matplotlib-base 3.8.2 py310h62c0568_0 conda-forge
matplotlib-inline 0.1.6 pyhd8ed1ab_0 conda-forge
mdurl 0.1.2 pyhd8ed1ab_0 conda-forge
mistune 3.0.2 pyhd8ed1ab_0 conda-forge
mpi 1.0 openmpi conda-forge
mpmath 1.3.0 pypi_0 pypi
msgpack-python 1.0.7 py310hd41b1e2_0 conda-forge
multidict 6.0.4 py310h2372a71_1 conda-forge
munkres 1.1.4 pyh9f0ad1d_0 conda-forge
nbclient 0.8.0 pyhd8ed1ab_0 conda-forge
nbconvert 7.14.2 pyhd8ed1ab_0 conda-forge
nbconvert-core 7.14.2 pyhd8ed1ab_0 conda-forge
nbconvert-pandoc 7.14.2 pyhd8ed1ab_0 conda-forge
nbformat 5.9.2 pyhd8ed1ab_0 conda-forge
nbsphinx 0.9.3 pyhd8ed1ab_0 conda-forge
nccl 2.19.4.1 h6103f9b_0 conda-forge
ncurses 6.4 h59595ed_2 conda-forge
nest-asyncio 1.6.0 pyhd8ed1ab_0 conda-forge
networkx 3.2.1 pyhd8ed1ab_0 conda-forge
ninja 1.11.1 h924138e_0 conda-forge
nodeenv 1.8.0 pyhd8ed1ab_0 conda-forge
notebook 7.0.7 pyhd8ed1ab_0 conda-forge
notebook-shim 0.2.3 pyhd8ed1ab_0 conda-forge
numba 0.57.1 py310h0f6aa51_0 conda-forge
numpy 1.24.4 py310ha4c1d20_0 conda-forge
numpydoc 1.6.0 pyhd8ed1ab_0 conda-forge
nvcc_linux-64 11.8 h41dc85b_23 conda-forge
nvcomp 3.0.5 h838ba91_0 conda-forge
nvidia-cublas-cu11 11.11.3.6 pypi_0 pypi
nvidia-cuda-cupti-cu11 11.8.87 pypi_0 pypi
nvidia-cuda-nvrtc-cu11 11.8.89 pypi_0 pypi
nvidia-cuda-runtime-cu11 11.8.89 pypi_0 pypi
nvidia-cudnn-cu11 8.7.0.84 pypi_0 pypi
nvidia-cufft-cu11 10.9.0.58 pypi_0 pypi
nvidia-curand-cu11 10.3.0.86 pypi_0 pypi
nvidia-cusolver-cu11 11.4.1.48 pypi_0 pypi
nvidia-cusparse-cu11 11.7.5.86 pypi_0 pypi
nvidia-nccl-cu11 2.19.3 pypi_0 pypi
nvidia-nvtx-cu11 11.8.86 pypi_0 pypi
nvtx 0.2.8 py310h2372a71_1 conda-forge
ogb 1.3.6 pypi_0 pypi
openjpeg 2.5.0 h488ebb8_3 conda-forge
openmpi 5.0.1 h4970cb7_101 conda-forge
openssl 3.2.0 hd590300_1 conda-forge
orc 1.9.2 h4b38347_0 conda-forge
outdated 0.2.2 pypi_0 pypi
overrides 7.7.0 pyhd8ed1ab_0 conda-forge
packaging 23.2 pyhd8ed1ab_0 conda-forge
pandas 1.5.3 py310h9b08913_1 conda-forge
pandoc 3.1.3 h32600fe_0 conda-forge
pandocfilters 1.5.0 pyhd8ed1ab_0 conda-forge
pango 1.50.14 ha41ecd1_2 conda-forge
parso 0.8.3 pyhd8ed1ab_0 conda-forge
partd 1.4.1 pyhd8ed1ab_0 conda-forge
pathspec 0.12.1 pyhd8ed1ab_0 conda-forge
pcre2 10.42 hcad00b1_0 conda-forge
pexpect 4.9.0 pyhd8ed1ab_0 conda-forge
pickleshare 0.7.5 py_1003 conda-forge
pillow 10.2.0 py310h01dd4db_0 conda-forge
pip 23.3.2 pyhd8ed1ab_0 conda-forge
pixman 0.43.0 h59595ed_0 conda-forge
pkgutil-resolve-name 1.3.10 pyhd8ed1ab_1 conda-forge
platformdirs 4.1.0 pyhd8ed1ab_0 conda-forge
pluggy 1.4.0 pyhd8ed1ab_0 conda-forge
pre-commit 3.6.0 pyha770c72_0 conda-forge
prometheus_client 0.19.0 pyhd8ed1ab_0 conda-forge
prompt-toolkit 3.0.42 pyha770c72_0 conda-forge
protobuf 4.24.4 py310h620c231_0 conda-forge
psutil 5.9.8 py310h2372a71_0 conda-forge
pthread-stubs 0.4 h36c2ea0_1001 conda-forge
ptxcompiler 0.8.1 py310h70a93da_2 conda-forge
ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge
pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge
py-cpuinfo 9.0.0 pyhd8ed1ab_0 conda-forge
pyarrow 14.0.2 py310hf9e7431_2_cpu conda-forge
pyarrow-hotfix 0.6 pyhd8ed1ab_0 conda-forge
pycodestyle 2.11.1 pypi_0 pypi
pycparser 2.21 pyhd8ed1ab_0 conda-forge
pydantic 2.6.0 pypi_0 pypi
pydantic-core 2.16.1 pypi_0 pypi
pydata-sphinx-theme 0.15.2 pyhd8ed1ab_0 conda-forge
pyg-lib 0.3.1+pt21cu118 pypi_0 pypi
pygments 2.17.2 pyhd8ed1ab_0 conda-forge
pylibcugraph 24.2.0 pypi_0 pypi
pylibcugraphops 24.02.00a13 cuda11_py310_240128_g2fd694cd_13 rapidsai-nightly
pylibraft 24.02.00a85 cuda11_py310_240128_g2822532f_85 rapidsai-nightly
pylibwholegraph 24.02.00a28 cuda11_py310_240128_g8cb7c5c_28 rapidsai-nightly
pynvml 11.4.1 pyhd8ed1ab_0 conda-forge
pyparsing 3.1.1 pyhd8ed1ab_0 conda-forge
pyproject-metadata 0.7.1 pyhd8ed1ab_0 conda-forge
pysocks 1.7.1 pyha2e5f31_6 conda-forge
pytest 8.0.0 pyhd8ed1ab_0 conda-forge
pytest-benchmark 4.0.0 pyhd8ed1ab_0 conda-forge
pytest-cov 4.1.0 pyhd8ed1ab_0 conda-forge
pytest-mpl 0.16.1 pyhd8ed1ab_0 conda-forge
pytest-xdist 3.5.0 pyhd8ed1ab_0 conda-forge
python 3.10.13 hd12c33a_1_cpython conda-forge
python-dateutil 2.8.2 pyhd8ed1ab_0 conda-forge
python-fastjsonschema 2.19.1 pyhd8ed1ab_0 conda-forge
python-json-logger 2.0.7 pyhd8ed1ab_0 conda-forge
python-louvain 0.16 pyhd8ed1ab_0 conda-forge
python_abi 3.10 4_cp310 conda-forge
pytz 2023.3.post1 pyhd8ed1ab_0 conda-forge
pyyaml 6.0.1 py310h2372a71_1 conda-forge
pyzmq 25.1.2 py310h795f18f_0 conda-forge
raft-dask 24.02.00a85 cuda11_py310_240128_g2822532f_85 rapidsai-nightly
rapids-dask-dependency 24.02.00a11 0 rapidsai-nightly
rdkit-pypi 2022.9.5 pypi_0 pypi
rdma-core 49.0 hd3aeb46_2 conda-forge
re2 2023.06.02 h2873b5e_0 conda-forge
readline 8.2 h8228510_1 conda-forge
recommonmark 0.7.1 pyhd8ed1ab_0 conda-forge
referencing 0.32.1 pyhd8ed1ab_0 conda-forge
requests 2.31.0 pyhd8ed1ab_0 conda-forge
rfc3339-validator 0.1.4 pyhd8ed1ab_0 conda-forge
rfc3986-validator 0.1.1 pyh9f0ad1d_0 conda-forge
rhash 1.4.4 hd590300_0 conda-forge
rich 13.7.0 pyhd8ed1ab_0 conda-forge
rmm 24.02.00a36 cuda11_py310_240129_g6c904f7b_36 rapidsai-nightly
rpds-py 0.17.1 py310hcb5633a_0 conda-forge
ruamel-yaml 0.18.5 pypi_0 pypi
ruamel-yaml-clib 0.2.8 pypi_0 pypi
s2n 1.4.1 h06160fa_0 conda-forge
scikit-build-core 0.8.0 pyh4af843d_0 conda-forge
scikit-learn 1.4.0 py310h1fdf081_0 conda-forge
scipy 1.12.0 py310hb13e2d6_2 conda-forge
sed 4.8 he412f7d_0 conda-forge
send2trash 1.8.2 pyh41d4057_0 conda-forge
setuptools 69.0.3 pyhd8ed1ab_0 conda-forge
six 1.16.0 pyh6c4a22f_0 conda-forge
snappy 1.1.10 h9fff704_0 conda-forge
sniffio 1.3.0 pyhd8ed1ab_0 conda-forge
snowballstemmer 2.2.0 pyhd8ed1ab_0 conda-forge
sortedcontainers 2.4.0 pyhd8ed1ab_0 conda-forge
soupsieve 2.5 pyhd8ed1ab_1 conda-forge
spdlog 1.12.0 hd2e6256_2 conda-forge
sphinx 5.3.0 pyhd8ed1ab_0 conda-forge
sphinx-copybutton 0.5.2 pyhd8ed1ab_0 conda-forge
sphinx-markdown-tables 0.0.17 pyh6c4a22f_0 conda-forge
sphinxcontrib-applehelp 1.0.8 pyhd8ed1ab_0 conda-forge
sphinxcontrib-devhelp 1.0.6 pyhd8ed1ab_0 conda-forge
sphinxcontrib-htmlhelp 2.0.5 pyhd8ed1ab_0 conda-forge
sphinxcontrib-jsmath 1.0.1 pyhd8ed1ab_0 conda-forge
sphinxcontrib-qthelp 1.0.7 pyhd8ed1ab_0 conda-forge
sphinxcontrib-serializinghtml 1.1.10 pyhd8ed1ab_0 conda-forge
sphinxcontrib-websupport 1.2.7 pyhd8ed1ab_0 conda-forge
stack_data 0.6.2 pyhd8ed1ab_0 conda-forge
sympy 1.12 pypi_0 pypi
sysroot_linux-64 2.17 h4a8ded7_13 conda-forge
tabulate 0.9.0 pyhd8ed1ab_1 conda-forge
tblib 3.0.0 pyhd8ed1ab_0 conda-forge
terminado 0.18.0 pyh0d859eb_0 conda-forge
threadpoolctl 3.2.0 pyha21a80b_0 conda-forge
tinycss2 1.2.1 pyhd8ed1ab_0 conda-forge
tk 8.6.13 noxft_h4845f30_101 conda-forge
toml 0.10.2 pyhd8ed1ab_0 conda-forge
tomli 2.0.1 pyhd8ed1ab_0 conda-forge
toolz 0.12.1 pyhd8ed1ab_0 conda-forge
torch 2.2.0+cu118 pypi_0 pypi
torch-cluster 1.6.3+pt21cu118 pypi_0 pypi
torch-scatter 2.1.2+pt21cu118 pypi_0 pypi
torch-sparse 0.6.18+pt21cu118 pypi_0 pypi
torch-spline-conv 1.2.2+pt21cu118 pypi_0 pypi
torchaudio 2.2.0+cu118 pypi_0 pypi
torchdata 0.7.1 pypi_0 pypi
torchvision 0.17.0+cu118 pypi_0 pypi
tornado 6.3.3 py310h2372a71_1 conda-forge
tqdm 4.66.1 pypi_0 pypi
traitlets 5.14.1 pyhd8ed1ab_0 conda-forge
triton 2.2.0 pypi_0 pypi
typer 0.9.0 pypi_0 pypi
types-python-dateutil 2.8.19.20240106 pyhd8ed1ab_0 conda-forge
typing-extensions 4.9.0 hd8ed1ab_0 conda-forge
typing_extensions 4.9.0 pyha770c72_0 conda-forge
typing_utils 0.1.0 pyhd8ed1ab_0 conda-forge
tzdata 2023d h0c530f3_0 conda-forge
ucx 1.15.0 h75e419f_3 conda-forge
ucx-proc 1.0.0 gpu rapidsai
ucx-py 0.36.00a4 py310_240129_g8f8f2c4_4 rapidsai-nightly
ukkonen 1.0.1 py310hd41b1e2_4 conda-forge
unicodedata2 15.1.0 py310h2372a71_0 conda-forge
uri-template 1.3.0 pyhd8ed1ab_0 conda-forge
urllib3 2.1.0 pyhd8ed1ab_0 conda-forge
virtualenv 20.25.0 pyhd8ed1ab_0 conda-forge
wcwidth 0.2.13 pyhd8ed1ab_0 conda-forge
webcolors 1.13 pyhd8ed1ab_0 conda-forge
webencodings 0.5.1 pyhd8ed1ab_2 conda-forge
websocket-client 1.7.0 pyhd8ed1ab_0 conda-forge
wget 1.20.3 ha35d2d1_1 conda-forge
wheel 0.42.0 pyhd8ed1ab_0 conda-forge
xorg-kbproto 1.0.7 h7f98852_1002 conda-forge
xorg-libice 1.1.1 hd590300_0 conda-forge
xorg-libsm 1.2.4 h7391055_0 conda-forge
xorg-libx11 1.8.7 h8ee46fc_0 conda-forge
xorg-libxau 1.0.11 hd590300_0 conda-forge
xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge
xorg-libxext 1.3.4 h0b41bf4_2 conda-forge
xorg-libxrender 0.9.11 hd590300_0 conda-forge
xorg-renderproto 0.11.1 h7f98852_1002 conda-forge
xorg-xextproto 7.3.0 h0b41bf4_1003 conda-forge
xorg-xproto 7.0.31 h7f98852_1007 conda-forge
xyzservices 2023.10.1 pyhd8ed1ab_0 conda-forge
xz 5.2.6 h166bdaf_0 conda-forge
yaml 0.2.5 h7f98852_2 conda-forge
yarl 1.9.4 py310h2372a71_0 conda-forge
zeromq 4.3.5 h59595ed_0 conda-forge
zict 3.0.0 pyhd8ed1ab_0 conda-forge
zipp 3.17.0 pyhd8ed1ab_0 conda-forge
zlib 1.2.13 hd590300_5 conda-forge
zstd 1.5.5 hfc55251_0 conda-forge
</pre></details>
Other/Misc.
I remove some errors from "Relevant log output" with similar output.
Code of Conduct
- [X] I agree to follow cuGraph's Code of Conduct
- [X] I have searched the open bugs and have found no duplicates for this bug report
@Gibyeng when you build from source, are you running "./build.sh all" or something else? Also, are you in a conda environment?
@Gibyeng when you build from source, are you running "./build.sh all" or something else? Also, are you in a conda environment?
@BradReesWork I follow the instruction here. I bulid a conda environment in which I run ./build.sh libcugraph pylibcugraph cugraph --skip_cpp_tests
@Gibyeng you're not building cuGraph-PyG but still trying to run the tests for it. I think what you want to do is cd cugraph/python/cugraph and then pytest. Just running pytest in the python directory will attempt to run tests for all packages.
Or if you do want to build cuGraph-PyG, then you need to run ./build.sh cugraph pylibcugraph libcugraph cugraph-pyg. Or ./build.sh all should build all packages, if you want to run tests for all packages.
