amos

@fmaguire Can you help me with this one? cheers.

@TommyH-Tran, I have added the use of `dask.dataframe` module recently to improve efficiency. It appears the module is not included in your environment. The requirements are in https://github.com/arpcard/rgi/blob/master/requirements.txt.

@biobrad version 5.2.1 is released. Do you want to switch?

@Rainjie-afk this looks like there are some non-ASCII characters in your input or your input fasta is not formatted correctly.

@asl I just tested this and there were no issues. see log below. Which commands were you using? ``` conda create -n rgi520 -c bioconda -c defaults -c conda-forge rgi=5.2.0...

@dcdanko-biotia I ran the following on Mac OS and I didn't get any errors you encountered: ``` # downloaded latest commit from https://github.com/arpcard/rgi # unzip rgi-master.zip file # load the...

@EugeneAeolus Sorry, unfortunately, the wheel is only available on the website. We will work on this in the future. Cheers.

@JALEM1 can you share the commands you used? Are all the 20 hits Strict hits or a mix? If it's possible please share the jsons so that we can help...

@JALEM1 do you have any updates?

@althonos Thank you, Martin! This looks awesome. I will review the code, but I think the best way is to have orf tools (i.e Prodigal and Pyrodigal) as an option....