yasa

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Add standardized framework for wearable validation

9

I think it could be useful to have a Python implementation of the analytical pipeline for testing sleep-tracking wearable, originally developed (in R) by @Luca-Menghini and @SRI-human-sleep: https://github.com/SRI-human-sleep/sleep-trackers-performance > Menghini,...

raphaelvallat

The following **issues** and **PRs** should be merged: - [x] #74 and #76 - [x] #73 and #75 - [x] #71 - [x] #82 (see https://github.com/raphaelvallat/yasa/pull/89) - [x] #85 -...

raphaelvallat

Speed improvements in spindles detection

1

The spindles_detect function can be very slow when multiple channels are present and/or the sampling rate is high. Most of the overhead comes from the [yasa.moving_transform](https://raphaelvallat.com/yasa/build/html/generated/yasa.moving_transform.html#yasa.moving_transform) and [yasa.stft_power](https://raphaelvallat.com/yasa/build/html/generated/yasa.stft_power.html#yasa.stft_power) function, which...

raphaelvallat

Original discussion with @[umair-hassan](https://github.com/umair-hassan) on https://github.com/raphaelvallat/yasa/pull/71 👇 

raphaelvallat

yasa mice branch

11

This issue contains brief details of what I changed to adapt `staging.py` to work with the recordings I had from mice. The most significant change is the use of `epoch_sec`...

matiasandina

Extra eeg channels in automatic sleep staging

13

Fantastic work! I was wondering if it's possible to feed extra EEG channels (e.g., frontal and occipital channels) to yasa.SleepStaging. Will this further improve the staging accuracy? I read the...

zixiao-yin

Bad channel detection

4

Nice job and very honest comparison to other models in the article. Do you plan to implement some bad channel detection ? Unproperly connected or highly noisy leads are currently...

Pierre-Bartet

Would be great to add IRASA analysis on the different sleep stages.

apavlo89

direct links to example datasets

1

I remember being a bit confused about where to find the example data when I started some tutorials a while back. I think it could be a lot easier for...

remrama

easier LightGBM install

1

The `LightGBM` requirement is [pip installable](https://pypi.org/project/lightgbm/) but [their documentation](https://lightgbm.readthedocs.io/en/v3.3.2/Installation-Guide.html) doesn't say so. I remember finding this very frustrating after I struggled (and failed) with a clunky install based on their...

remrama