Pradeep Reddy Raamana

thanks Richard, can i see some example scripts that you use for freeview and the corresponding txt/config files?

Cool, that's what I expected. Can I see an example output?

Cool - I was thinking of the full interface that would utilize these slice-wise overlays, but I now realize you would focus on just one slice at a time right?...

not sure you realize it, but this is HUGE project, i mean GIGANTIC project :): "a web/R app for some of our larger projects that have multiple sites so we...

Hey sorry guys, I haven't gotten to this yet, but FYI v0.6 from #57 adds a number of improvements and fixes you might like. i'd be working on this batch...

not sure if I fully understand your issue, but visualqc already offers a way to check alignment/registration accuracy with `vqcalign` or `visualqc_alignment` - see examples here: https://raamana.github.io/visualqc/gallery_registration_unimodal.html Usage is noted...

basic implementation started with f8129184bda7aa6bcfdf127a0e2451320fa05dd1

That is how it was originally downloaded but we copy pasted it to another computer (outside dataalad), that’s probably the source of the error but we can see the MRI...

I get the same error in the computer where I did the `datalad get` btw: ```bash (base) $ 19:04:49 Quark ds002785 >> vqct1 -b $PWD -old Anatomical MRI module Time...

now that I think about it, I realize I only installed one of the derivatives : freesurfer, and not the base BIDS dataset. I am now running `datalad get sub-????/anat/*`...