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Bioconductor does not yet build and check packages for R version 4.2

Open buehlere opened this issue 3 years ago • 20 comments

When building for Windows Server 2008 R2 SP1, R-devel, we get a strange error about Bioconductor not yet building for R version 4.2. This seems to be be an issue with setting up the container for testing rather than building our package. Any ideas what might might be happening? Please let me know if there is any other information I can provide!

  • error: Error: Bioconductor does not yet build and check packages for R version 4.2; see https://bioconductor.org/install Execution halted
  • text-link: https://builder.r-hub.io/status/original/wCorr_1.9.0.tar.gz-e610d895ffc773f6b07e15a9c54d69c7

Thanks for the help!

buehlere avatar May 20 '21 14:05 buehlere

Same issue

jasonmoy28 avatar May 21 '21 22:05 jasonmoy28

Same here

lycium0605 avatar May 25 '21 15:05 lycium0605

Same issue

rafzamb avatar May 27 '21 10:05 rafzamb

Same issue

xiayh17 avatar May 30 '21 05:05 xiayh17

Same Issue

ilyakorsunsky avatar May 30 '21 15:05 ilyakorsunsky

ditto....

glgrabow avatar May 30 '21 16:05 glgrabow

I encountered this issue too on rhub. Relatedly, you can't install any bioconductor packages on r-devel (currently, 4.2)

ncchung avatar Jun 01 '21 14:06 ncchung

Same issue.

SandraCastroPearson avatar Jun 03 '21 21:06 SandraCastroPearson

Same here.

palmjulia avatar Jun 04 '21 08:06 palmjulia

Same here

ycphs avatar Jun 08 '21 14:06 ycphs

Same issue. Any one found a solution?

ksurana21 avatar Jun 29 '21 15:06 ksurana21

Same issue.

ablack3 avatar Jul 02 '21 17:07 ablack3

Can I submit the package to CRAN with this error?

nanhung avatar Jul 03 '21 17:07 nanhung

Can I submit the package to CRAN with this error?

I think you do. I submitted a package without issues despite this error.

gorkang avatar Jul 03 '21 17:07 gorkang

I think it should work. I submitted my package and it's on CRAN now. Not sure if this will change in the future.

SandraCastroPearson avatar Jul 04 '21 19:07 SandraCastroPearson

Same issue

pachoning avatar Oct 05 '21 09:10 pachoning

Same issue, now for R version 4.3

JiscaH avatar May 09 '22 10:05 JiscaH

Same issue, for R version 4.3

georgiosseitidis avatar Jun 01 '22 12:06 georgiosseitidis

Same issue nor for R version 4.3. Given the amount of people reporting this issue here, they should be aware of it. Hence, I will submit regardless.

fritzbayer avatar Jul 26 '22 20:07 fritzbayer

This issue will not nullify a submission. I have just ignored it.

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On Jul 26, 2022, at 4:46 PM, Fritz Bayer @.***> wrote:

 Same issue nor for R version 4.3. Given the amount of people reporting this issue here, they should be aware of it. Hence, I will submit regardless.

— Reply to this email directly, view it on GitHub, or unsubscribe. You are receiving this because you commented.

glgrabow avatar Jul 26 '22 21:07 glgrabow

This is a warning that you can ignore, it is coming from another package that we use to install Bioconductor packages. Hopefully we can improve this in the future.

gaborcsardi avatar Aug 31 '22 11:08 gaborcsardi