check_with_sanitizers - PREPERROR

[gagolews]

Hi! Excellent work on this service, super useful for the solaris build chain.

This time though I'm getting the following error message quickly after a call to check_with_sanitizers:

Status for build genieclust_0.9.4.tar.gz-a8b1456f4ec3482abf89b33f72146b53
Status: error
Duration: 1 seconds
Preparing

   1#> Started by user r-hub Jenkins admin

   2#> Building remotely on linux-builder-2.internal.cloudapp.net-31108a3d (slave swarm linux) in workspace /home/rhub/workspace/genieclust_0.9.4.tar.gz-a8b1456f4ec3482abf89b33f72146b53

   3#> java.io.IOException: Failed to mkdirs: /home/rhub/workspace/genieclust_0.9.4.tar.gz-a8b1456f4ec3482abf89b33f72146b53

   4#> at hudson.FilePath.mkdirs(FilePath.java:1191)

   5#> at hudson.model.AbstractProject.checkout(AbstractProject.java:1267)

   6#> at hudson.model.AbstractBuild$AbstractBuildExecution.defaultCheckout(AbstractBuild.java:604)

   7#> at jenkins.scm.SCMCheckoutStrategy.checkout(SCMCheckoutStrategy.java:86)

   8#> at hudson.model.AbstractBuild$AbstractBuildExecution.run(AbstractBuild.java:529)

   9#> at hudson.model.Run.execute(Run.java:1741)

  10#> at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:43)

  11#> at hudson.model.ResourceController.execute(ResourceController.java:98)

  12#> at hudson.model.Executor.run(Executor.java:410)

  13#> Pinging https://builder.r-hub.io/build/FAILURE/genieclust_0.9.4.tar.gz-a8b1456f4ec3482abf89b33f72146b53/2020-07-31T04:32:32Z

  14#> {"status":"ok"}

  15#> Finished: FAILURE

url: https://builder.r-hub.io/status/genieclust_0.9.4.tar.gz-a8b1456f4ec3482abf89b33f72146b53

[gaborcsardi]

Thanks! Should be fixed now.

[gagolews]

Awesome.

However, I received an email like:

but the status (see https://builder.r-hub.io/status/genieclust_0.9.4.tar.gz-c422065b934a44009fc531b0e17354d0) says 'success'.

[gaborcsardi]

Because of this:

10775#> Warning messages:
10776#> 1: In i.p(...) :
10777#> installation of package ‘checkmate’ had non-zero exit status
10778#> 2: In i.p(...) : installation of package ‘BBmisc’ had non-zero exit status
10779#> 3: In i.p(...) :
10780#> installation of package ‘emstreeR’ had non-zero exit status
10781#> >

[gagolews]

Aaah, right, okay, thanks!

[gaborcsardi]

I am not sure why this is, possibly our container has an older R-devel. Let me try to re-build it.

[gaborcsardi]

Yeah, our base container hasn't been up updated for 5 months, let me build one from scratch: https://hub.docker.com/r/rocker/r-devel-san

[gaborcsardi]

@gagolews OK, updated it, please try again.

[gagolews]

Hmmm... I'm receiving some mixed signals here...

The system sent 2 emails, one after another:

Both include a link to https://builder.r-hub.io/status/genieclust_0.9.5.tar.gz-580c56b0378845749c60eda49cd472ca

Plus I was wondering where I can find the asan/ubsan results? They don't seem to be present amongst the artifacts https://artifacts.r-hub.io/genieclust_0.9.5.tar.gz-580c56b0378845749c60eda49cd472ca/ ?

[gaborcsardi]

This issue is about the previous R-hub system, it does not apply to the new system, so I am closing it now. Please see https://r-hub.github.io/rhub/ for the new system, R-hub v2.