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arrow example build fails
Full output below. The same version of arrow (just released 11 days ago) built fine last week.
I'll try with Alpine 3.18, or 3.19, we should update soon, anyway.
* installing *source* package ‘arrow’ ...
** package ‘arrow’ successfully unpacked and MD5 sums checked
** using staged installation
*** pkg-config found.
*** Found local C++ source: 'tools/cpp'
*** Building libarrow from source
For build options and troubleshooting, see the install guide:
https://arrow.apache.org/docs/r/articles/install.html
**** cmake 3.23.5: /usr/bin/cmake
**** arrow
**** Error building Arrow C++.
**** Printing contents of build log because the build failed while ARROW_R_DEV was set to FALSE
++ pwd
+ : /tmp/RtmpjaifAp/R.INSTALL59a11dbf8ed/arrow
+ : tools/cpp
+ : /tmp/RtmpbjEemO/file68c5abd6127
+ : libarrow/arrow-15.0.1
+ : /usr/bin/cmake
++ cd tools/cpp
++ pwd
+ SOURCE_DIR=/tmp/RtmpjaifAp/R.INSTALL59a11dbf8ed/arrow/tools/cpp
++ mkdir -p libarrow/arrow-15.0.1
++ cd libarrow/arrow-15.0.1
++ pwd
+ DEST_DIR=/tmp/RtmpjaifAp/R.INSTALL59a11dbf8ed/arrow/libarrow/arrow-15.0.1
+ '[' 2 = '' ']'
+ '[' '' '!=' '' ']'
+ '[' '' = false ']'
+ ARROW_DEFAULT_PARAM=OFF
+ case "$CXX" in
+ mkdir -p /tmp/RtmpbjEemO/file68c5abd6127
+ pushd /tmp/RtmpbjEemO/file68c5abd6127
/tmp/RtmpbjEemO/file68c5abd6127 /tmp/RtmpjaifAp/R.INSTALL59a11dbf8ed/arrow
+ /usr/bin/cmake -DARROW_BOOST_USE_SHARED=OFF -DARROW_BUILD_TESTS=OFF -DARROW_BUILD_SHARED=OFF -DARROW_BUILD_STATIC=ON -DARROW_ACERO=ON -DARROW_COMPUTE=ON -DARROW_CSV=ON -DARROW_DATASET=ON -DARROW_DEPENDENCY_SOURCE=AUTO -DAWSSDK_SOURCE= -DBoost_SOURCE= -Dlz4_SOURCE= -DARROW_FILESYSTEM=ON -DARROW_GCS=OFF -DARROW_JEMALLOC=OFF -DARROW_MIMALLOC=ON -DARROW_JSON=ON -DARROW_PARQUET=ON -DARROW_S3=OFF -DARROW_WITH_BROTLI=OFF -DARROW_WITH_BZ2=OFF -DARROW_WITH_LZ4=ON -DARROW_WITH_RE2=ON -DARROW_WITH_SNAPPY=ON -DARROW_WITH_UTF8PROC=ON -DARROW_WITH_ZLIB=OFF -DARROW_WITH_ZSTD=OFF -DARROW_VERBOSE_THIRDPARTY_BUILD=OFF -DCMAKE_BUILD_TYPE=Release -DCMAKE_FIND_DEBUG_MODE=OFF -DCMAKE_INSTALL_LIBDIR=lib -DCMAKE_INSTALL_PREFIX=/tmp/RtmpjaifAp/R.INSTALL59a11dbf8ed/arrow/libarrow/arrow-15.0.1 -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_UNITY_BUILD=OFF -Dre2_SOURCE=BUNDLED -Dxsimd_SOURCE= -Dzstd_SOURCE= -G 'Unix Makefiles' /tmp/RtmpjaifAp/R.INSTALL59a11dbf8ed/arrow/tools/cpp
-- Building using CMake version: 3.23.5
-- The C compiler identification is GNU 11.2.1
-- The CXX compiler identification is GNU 11.2.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Arrow version: 15.0.1 (full: '15.0.1')
-- Arrow SO version: 1500 (full: 1500.1.0)
-- clang-tidy 14 not found
-- clang-format 14 not found
-- Could NOT find ClangTools (missing: CLANG_FORMAT_BIN CLANG_TIDY_BIN)
-- infer not found
-- Could NOT find Python3 (missing: Python3_EXECUTABLE Interpreter)
-- Found cpplint executable at /tmp/RtmpjaifAp/R.INSTALL59a11dbf8ed/arrow/tools/cpp/build-support/cpplint.py
-- System processor: x86_64
-- Performing Test CXX_SUPPORTS_SSE4_2
-- Performing Test CXX_SUPPORTS_SSE4_2 - Success
-- Performing Test CXX_SUPPORTS_AVX2
-- Performing Test CXX_SUPPORTS_AVX2 - Success
-- Performing Test CXX_SUPPORTS_AVX512
-- Performing Test CXX_SUPPORTS_AVX512 - Success
-- Arrow build warning level: PRODUCTION
-- Using ld linker
-- Build Type: RELEASE
-- Performing Test CXX_LINKER_SUPPORTS_VERSION_SCRIPT
-- Performing Test CXX_LINKER_SUPPORTS_VERSION_SCRIPT - Success
-- Using AUTO approach to find dependencies
-- ARROW_ABSL_BUILD_VERSION: 20211102.0
-- ARROW_ABSL_BUILD_SHA256_CHECKSUM: dcf71b9cba8dc0ca9940c4b316a0c796be8fab42b070bb6b7cab62b48f0e66c4
-- ARROW_AWS_C_AUTH_BUILD_VERSION: v0.6.22
-- ARROW_AWS_C_AUTH_BUILD_SHA256_CHECKSUM: 691a6b4418afcd3dc141351b6ad33fccd8e3ff84df0e9e045b42295d284ee14c
-- ARROW_AWS_C_CAL_BUILD_VERSION: v0.5.20
-- ARROW_AWS_C_CAL_BUILD_SHA256_CHECKSUM: acc352359bd06f8597415c366cf4ec4f00d0b0da92d637039a73323dd55b6cd0
-- ARROW_AWS_C_COMMON_BUILD_VERSION: v0.8.9
-- ARROW_AWS_C_COMMON_BUILD_SHA256_CHECKSUM: 2f3fbaf7c38eae5a00e2a816d09b81177f93529ae8ba1b82dc8f31407565327a
-- ARROW_AWS_C_COMPRESSION_BUILD_VERSION: v0.2.16
-- ARROW_AWS_C_COMPRESSION_BUILD_SHA256_CHECKSUM: 044b1dbbca431a07bde8255ef9ec443c300fc60d4c9408d4b862f65e496687f4
-- ARROW_AWS_C_EVENT_STREAM_BUILD_VERSION: v0.2.18
-- ARROW_AWS_C_EVENT_STREAM_BUILD_SHA256_CHECKSUM: 310ca617f713bf664e4c7485a3d42c1fb57813abd0107e49790d107def7cde4f
-- ARROW_AWS_C_HTTP_BUILD_VERSION: v0.7.3
-- ARROW_AWS_C_HTTP_BUILD_SHA256_CHECKSUM: 07e16c6bf5eba6f0dea96b6f55eae312a7c95b736f4d2e4a210000f45d8265ae
-- ARROW_AWS_C_IO_BUILD_VERSION: v0.13.14
-- ARROW_AWS_C_IO_BUILD_SHA256_CHECKSUM: 12b66510c3d9a4f7e9b714e9cfab2a5bf835f8b9ce2f909d20ae2a2128608c71
-- ARROW_AWS_C_MQTT_BUILD_VERSION: v0.8.4
-- ARROW_AWS_C_MQTT_BUILD_SHA256_CHECKSUM: 232eeac63e72883d460c686a09b98cdd811d24579affac47c5c3f696f956773f
-- ARROW_AWS_C_S3_BUILD_VERSION: v0.2.3
-- ARROW_AWS_C_S3_BUILD_SHA256_CHECKSUM: a00b3c9f319cd1c9aa2c3fa15098864df94b066dcba0deaccbb3caa952d902fe
-- ARROW_AWS_C_SDKUTILS_BUILD_VERSION: v0.1.6
-- ARROW_AWS_C_SDKUTILS_BUILD_SHA256_CHECKSUM: 8a2951344b2fb541eab1e9ca17c18a7fcbfd2aaff4cdd31d362d1fad96111b91
-- ARROW_AWS_CHECKSUMS_BUILD_VERSION: v0.1.13
-- ARROW_AWS_CHECKSUMS_BUILD_SHA256_CHECKSUM: 0f897686f1963253c5069a0e495b85c31635ba146cd3ac38cc2ea31eaf54694d
-- ARROW_AWS_CRT_CPP_BUILD_VERSION: v0.18.16
-- ARROW_AWS_CRT_CPP_BUILD_SHA256_CHECKSUM: 9e69bc1dc4b50871d1038aa9ff6ddeb4c9b28f7d6b5e5b1b69041ccf50a13483
-- ARROW_AWS_LC_BUILD_VERSION: v1.3.0
-- ARROW_AWS_LC_BUILD_SHA256_CHECKSUM: ae96a3567161552744fc0cae8b4d68ed88b1ec0f3d3c98700070115356da5a37
-- ARROW_AWSSDK_BUILD_VERSION: 1.10.55
-- ARROW_AWSSDK_BUILD_SHA256_CHECKSUM: 2d552fb1a84bef4a9b65e34aa7031851ed2aef5319e02cc6e4cb735c48aa30de
-- ARROW_AZURE_SDK_BUILD_VERSION: azure-core_1.10.3
-- ARROW_AZURE_SDK_BUILD_SHA256_CHECKSUM: dd624c2f86adf474d2d0a23066be6e27af9cbd7e3f8d9d8fd7bf981e884b7b48
-- ARROW_BOOST_BUILD_VERSION: 1.81.0
-- ARROW_BOOST_BUILD_SHA256_CHECKSUM: 9e0ffae35528c35f90468997bc8d99500bf179cbae355415a89a600c38e13574
-- ARROW_BROTLI_BUILD_VERSION: v1.0.9
-- ARROW_BROTLI_BUILD_SHA256_CHECKSUM: f9e8d81d0405ba66d181529af42a3354f838c939095ff99930da6aa9cdf6fe46
-- ARROW_BZIP2_BUILD_VERSION: 1.0.8
-- ARROW_BZIP2_BUILD_SHA256_CHECKSUM: ab5a03176ee106d3f0fa90e381da478ddae405918153cca248e682cd0c4a2269
-- ARROW_CARES_BUILD_VERSION: 1.17.2
-- ARROW_CARES_BUILD_SHA256_CHECKSUM: 4803c844ce20ce510ef0eb83f8ea41fa24ecaae9d280c468c582d2bb25b3913d
-- ARROW_CRC32C_BUILD_VERSION: 1.1.2
-- ARROW_CRC32C_BUILD_SHA256_CHECKSUM: ac07840513072b7fcebda6e821068aa04889018f24e10e46181068fb214d7e56
-- ARROW_GBENCHMARK_BUILD_VERSION: v1.7.1
-- ARROW_GBENCHMARK_BUILD_SHA256_CHECKSUM: 6430e4092653380d9dc4ccb45a1e2dc9259d581f4866dc0759713126056bc1d7
-- ARROW_GFLAGS_BUILD_VERSION: v2.2.2
-- ARROW_GFLAGS_BUILD_SHA256_CHECKSUM: 34af2f15cf7367513b352bdcd2493ab14ce43692d2dcd9dfc499492966c64dcf
-- ARROW_GLOG_BUILD_VERSION: v0.5.0
-- ARROW_GLOG_BUILD_SHA256_CHECKSUM: eede71f28371bf39aa69b45de23b329d37214016e2055269b3b5e7cfd40b59f5
-- ARROW_GOOGLE_CLOUD_CPP_BUILD_VERSION: v2.12.0
-- ARROW_GOOGLE_CLOUD_CPP_BUILD_SHA256_CHECKSUM: 8cda870803925c62de8716a765e03eb9d34249977e5cdb7d0d20367e997a55e2
-- ARROW_GRPC_BUILD_VERSION: v1.46.3
-- ARROW_GRPC_BUILD_SHA256_CHECKSUM: d6cbf22cb5007af71b61c6be316a79397469c58c82a942552a62e708bce60964
-- ARROW_GTEST_BUILD_VERSION: 1.11.0
-- ARROW_GTEST_BUILD_SHA256_CHECKSUM: b4870bf121ff7795ba20d20bcdd8627b8e088f2d1dab299a031c1034eddc93d5
-- ARROW_JEMALLOC_BUILD_VERSION: 5.3.0
-- ARROW_JEMALLOC_BUILD_SHA256_CHECKSUM: 2db82d1e7119df3e71b7640219b6dfe84789bc0537983c3b7ac4f7189aecfeaa
-- ARROW_LZ4_BUILD_VERSION: v1.9.4
-- ARROW_LZ4_BUILD_SHA256_CHECKSUM: 0b0e3aa07c8c063ddf40b082bdf7e37a1562bda40a0ff5272957f3e987e0e54b
-- ARROW_MIMALLOC_BUILD_VERSION: v2.0.6
-- ARROW_MIMALLOC_BUILD_SHA256_CHECKSUM: 9f05c94cc2b017ed13698834ac2a3567b6339a8bde27640df5a1581d49d05ce5
-- ARROW_NLOHMANN_JSON_BUILD_VERSION: v3.10.5
-- ARROW_NLOHMANN_JSON_BUILD_SHA256_CHECKSUM: 5daca6ca216495edf89d167f808d1d03c4a4d929cef7da5e10f135ae1540c7e4
-- ARROW_OPENTELEMETRY_BUILD_VERSION: v1.8.1
-- ARROW_OPENTELEMETRY_BUILD_SHA256_CHECKSUM: 3d640201594b07f08dade9cd1017bd0b59674daca26223b560b9bb6bf56264c2
-- ARROW_OPENTELEMETRY_PROTO_BUILD_VERSION: v0.17.0
-- ARROW_OPENTELEMETRY_PROTO_BUILD_SHA256_CHECKSUM: f269fbcb30e17b03caa1decd231ce826e59d7651c0f71c3b28eb5140b4bb5412
-- ARROW_ORC_BUILD_VERSION: 1.9.2
-- ARROW_ORC_BUILD_SHA256_CHECKSUM: 7f46f2c184ecefd6791f1a53fb062286818bd8710c3f08b94dd3cac365e240ee
-- ARROW_PROTOBUF_BUILD_VERSION: v21.3
-- ARROW_PROTOBUF_BUILD_SHA256_CHECKSUM: 2f723218f6cb709ae4cdc4fb5ed56a5951fc5d466f0128ce4c946b8c78c8c49f
-- ARROW_RAPIDJSON_BUILD_VERSION: 232389d4f1012dddec4ef84861face2d2ba85709
-- ARROW_RAPIDJSON_BUILD_SHA256_CHECKSUM: b9290a9a6d444c8e049bd589ab804e0ccf2b05dc5984a19ed5ae75d090064806
-- ARROW_RE2_BUILD_VERSION: 2022-06-01
-- ARROW_RE2_BUILD_SHA256_CHECKSUM: f89c61410a072e5cbcf8c27e3a778da7d6fd2f2b5b1445cd4f4508bee946ab0f
-- ARROW_SNAPPY_BUILD_VERSION: 1.1.10
-- ARROW_SNAPPY_BUILD_SHA256_CHECKSUM: 49d831bffcc5f3d01482340fe5af59852ca2fe76c3e05df0e67203ebbe0f1d90
-- ARROW_SUBSTRAIT_BUILD_VERSION: v0.27.0
-- ARROW_SUBSTRAIT_BUILD_SHA256_CHECKSUM: 4ed375f69d972a57fdc5ec406c17003a111831d8640d3f1733eccd4b3ff45628
-- ARROW_S2N_TLS_BUILD_VERSION: v1.3.35
-- ARROW_S2N_TLS_BUILD_SHA256_CHECKSUM: 9d32b26e6bfcc058d98248bf8fc231537e347395dd89cf62bb432b55c5da990d
-- ARROW_THRIFT_BUILD_VERSION: 0.16.0
-- ARROW_THRIFT_BUILD_SHA256_CHECKSUM: f460b5c1ca30d8918ff95ea3eb6291b3951cf518553566088f3f2be8981f6209
-- ARROW_UCX_BUILD_VERSION: 1.12.1
-- ARROW_UCX_BUILD_SHA256_CHECKSUM: 9bef31aed0e28bf1973d28d74d9ac4f8926c43ca3b7010bd22a084e164e31b71
-- ARROW_UTF8PROC_BUILD_VERSION: v2.7.0
-- ARROW_UTF8PROC_BUILD_SHA256_CHECKSUM: 4bb121e297293c0fd55f08f83afab6d35d48f0af4ecc07523ad8ec99aa2b12a1
-- ARROW_XSIMD_BUILD_VERSION: 9.0.1
-- ARROW_XSIMD_BUILD_SHA256_CHECKSUM: b1bb5f92167fd3a4f25749db0be7e61ed37e0a5d943490f3accdcd2cd2918cc0
-- ARROW_ZLIB_BUILD_VERSION: 1.3.1
-- ARROW_ZLIB_BUILD_SHA256_CHECKSUM: 9a93b2b7dfdac77ceba5a558a580e74667dd6fede4585b91eefb60f03b72df23
-- ARROW_ZSTD_BUILD_VERSION: 1.5.5
-- ARROW_ZSTD_BUILD_SHA256_CHECKSUM: 9c4396cc829cfae319a6e2615202e82aad41372073482fce286fac78646d3ee4
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE
-- Looking for _M_ARM64
-- Looking for _M_ARM64 - not found
-- Looking for __SIZEOF_INT128__
-- Looking for __SIZEOF_INT128__ - found
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR) (Required is at least version "1.58")
-- Boost include dir: Boost_INCLUDE_DIR-NOTFOUND
CMake Warning at cmake_modules/FindSnappyAlt.cmake:29 (find_package):
By not providing "FindSnappy.cmake" in CMAKE_MODULE_PATH this project has
asked CMake to find a package configuration file provided by "Snappy", but
CMake did not find one.
Could not find a package configuration file provided by "Snappy" with any
of the following names:
SnappyConfig.cmake
snappy-config.cmake
Add the installation prefix of "Snappy" to CMAKE_PREFIX_PATH or set
"Snappy_DIR" to a directory containing one of the above files. If "Snappy"
provides a separate development package or SDK, be sure it has been
installed.
Call Stack (most recent call first):
cmake_modules/ThirdpartyToolchain.cmake:288 (find_package)
cmake_modules/ThirdpartyToolchain.cmake:1380 (resolve_dependency)
CMakeLists.txt:542 (include)
-- Could NOT find SnappyAlt (missing: Snappy_LIB Snappy_INCLUDE_DIR)
-- Building snappy from source
-- Building without OpenSSL support. Minimum OpenSSL version 1.0.2 required.
CMake Warning at cmake_modules/FindThriftAlt.cmake:56 (find_package):
By not providing "FindThrift.cmake" in CMAKE_MODULE_PATH this project has
asked CMake to find a package configuration file provided by "Thrift", but
CMake did not find one.
Could not find a package configuration file provided by "Thrift" (requested
version 0.11.0) with any of the following names:
ThriftConfig.cmake
thrift-config.cmake
Add the installation prefix of "Thrift" to CMAKE_PREFIX_PATH or set
"Thrift_DIR" to a directory containing one of the above files. If "Thrift"
provides a separate development package or SDK, be sure it has been
installed.
Call Stack (most recent call first):
cmake_modules/ThirdpartyToolchain.cmake:288 (find_package)
cmake_modules/ThirdpartyToolchain.cmake:1713 (resolve_dependency)
CMakeLists.txt:542 (include)
-- Checking for module 'thrift'
-- Package 'thrift', required by 'virtual:world', not found
-- Could NOT find ThriftAlt: Found unsuitable version "", but required is at least "0.11.0" (found ThriftAlt_LIB-NOTFOUND)
-- Building Apache Thrift from source
-- Building (vendored) mimalloc from source
CMake Warning at cmake_modules/FindRapidJSONAlt.cmake:29 (find_package):
By not providing "FindRapidJSON.cmake" in CMAKE_MODULE_PATH this project
has asked CMake to find a package configuration file provided by
"RapidJSON", but CMake did not find one.
Could not find a package configuration file provided by "RapidJSON"
(requested version 1.1.0) with any of the following names:
RapidJSONConfig.cmake
rapidjson-config.cmake
Add the installation prefix of "RapidJSON" to CMAKE_PREFIX_PATH or set
"RapidJSON_DIR" to a directory containing one of the above files. If
"RapidJSON" provides a separate development package or SDK, be sure it has
been installed.
Call Stack (most recent call first):
cmake_modules/ThirdpartyToolchain.cmake:288 (find_package)
cmake_modules/ThirdpartyToolchain.cmake:2350 (resolve_dependency)
CMakeLists.txt:542 (include)
-- Could NOT find RapidJSONAlt (missing: RAPIDJSON_INCLUDE_DIR) (Required is at least version "1.1.0")
-- Building RapidJSON from source
CMake Warning at cmake_modules/ThirdpartyToolchain.cmake:288 (find_package):
By not providing "Findxsimd.cmake" in CMAKE_MODULE_PATH this project has
asked CMake to find a package configuration file provided by "xsimd", but
CMake did not find one.
Could not find a package configuration file provided by "xsimd" with any of
the following names:
xsimdConfig.cmake
xsimd-config.cmake
Add the installation prefix of "xsimd" to CMAKE_PREFIX_PATH or set
"xsimd_DIR" to a directory containing one of the above files. If "xsimd"
provides a separate development package or SDK, be sure it has been
installed.
Call Stack (most recent call first):
cmake_modules/ThirdpartyToolchain.cmake:2402 (resolve_dependency)
CMakeLists.txt:542 (include)
-- Building xsimd from source
CMake Warning at cmake_modules/Findlz4Alt.cmake:29 (find_package):
By not providing "Findlz4.cmake" in CMAKE_MODULE_PATH this project has
asked CMake to find a package configuration file provided by "lz4", but
CMake did not find one.
Could not find a package configuration file provided by "lz4" with any of
the following names:
lz4Config.cmake
lz4-config.cmake
Add the installation prefix of "lz4" to CMAKE_PREFIX_PATH or set "lz4_DIR"
to a directory containing one of the above files. If "lz4" provides a
separate development package or SDK, be sure it has been installed.
Call Stack (most recent call first):
cmake_modules/ThirdpartyToolchain.cmake:288 (find_package)
cmake_modules/ThirdpartyToolchain.cmake:2493 (resolve_dependency)
CMakeLists.txt:542 (include)
-- Checking for module 'liblz4'
-- Package 'liblz4', required by 'virtual:world', not found
-- Could NOT find lz4Alt (missing: LZ4_LIB LZ4_INCLUDE_DIR)
-- Building LZ4 from source
-- Building RE2 from source
-- Could NOT find utf8proc: Found unsuitable version "", but required is at least "2.2.0" (found utf8proc_LIB-NOTFOUND)
-- Building utf8proc from source
-- Found hdfs.h at: /tmp/RtmpjaifAp/R.INSTALL59a11dbf8ed/arrow/tools/cpp/thirdparty/hadoop/include/hdfs.h
-- All bundled static libraries: Snappy::snappy-static;thrift::thrift;mimalloc::mimalloc;LZ4::lz4;re2::re2;utf8proc::utf8proc
-- CMAKE_C_FLAGS: -D__MUSL__ -Wall -fno-semantic-interposition -msse4.2
-- CMAKE_CXX_FLAGS: -Wno-noexcept-type -D__MUSL__ -fdiagnostics-color=always -Wall -fno-semantic-interposition -msse4.2
-- CMAKE_C_FLAGS_RELEASE: -O3 -DNDEBUG -O2 -ftree-vectorize
-- CMAKE_CXX_FLAGS_RELEASE: -O3 -DNDEBUG -O2 -ftree-vectorize
-- Creating bundled static library target arrow_bundled_dependencies at /tmp/RtmpbjEemO/file68c5abd6127/release/libarrow_bundled_dependencies.a
-- Looking for backtrace
-- Looking for backtrace - not found
-- Could NOT find Backtrace (missing: Backtrace_LIBRARY Backtrace_INCLUDE_DIR)
-- ---------------------------------------------------------------------
-- Arrow version: 15.0.1
--
-- Build configuration summary:
-- Generator: Unix Makefiles
-- Build type: RELEASE
-- Source directory: /tmp/RtmpjaifAp/R.INSTALL59a11dbf8ed/arrow/tools/cpp
-- Install prefix: /tmp/RtmpjaifAp/R.INSTALL59a11dbf8ed/arrow/libarrow/arrow-15.0.1
--
-- Compile and link options:
--
-- ARROW_CXXFLAGS="" [default=""]
-- Compiler flags to append when compiling Arrow
-- ARROW_BUILD_STATIC=ON [default=ON]
-- Build static libraries
-- ARROW_BUILD_SHARED=OFF [default=ON]
-- Build shared libraries
-- ARROW_PACKAGE_KIND="" [default=""]
-- Arbitrary string that identifies the kind of package
-- (for informational purposes)
-- ARROW_GIT_ID="" [default=""]
-- The Arrow git commit id (if any)
-- ARROW_GIT_DESCRIPTION="" [default=""]
-- The Arrow git commit description (if any)
-- ARROW_NO_DEPRECATED_API=OFF [default=OFF]
-- Exclude deprecated APIs from build
-- ARROW_POSITION_INDEPENDENT_CODE=ON [default=ON]
-- Whether to create position-independent target
-- ARROW_USE_CCACHE=ON [default=ON]
-- Use ccache when compiling (if available)
-- ARROW_USE_SCCACHE=ON [default=ON]
-- Use sccache when compiling (if available),
-- takes precedence over ccache if a storage backend is configured
-- ARROW_USE_LD_GOLD=OFF [default=OFF]
-- Use ld.gold for linking on Linux (if available)
-- ARROW_USE_PRECOMPILED_HEADERS=OFF [default=OFF]
-- Use precompiled headers when compiling
-- ARROW_SIMD_LEVEL=SSE4_2 [default=DEFAULT|NONE|SSE4_2|AVX2|AVX512|NEON|SVE|SVE128|SVE256|SVE512]
-- Compile-time SIMD optimization level
-- ARROW_RUNTIME_SIMD_LEVEL=MAX [default=MAX|NONE|SSE4_2|AVX2|AVX512]
-- Max runtime SIMD optimization level
-- ARROW_ALTIVEC=ON [default=ON]
-- Build with Altivec if compiler has support
-- ARROW_RPATH_ORIGIN=OFF [default=OFF]
-- Build Arrow libraries with RATH set to $ORIGIN
-- ARROW_INSTALL_NAME_RPATH=ON [default=ON]
-- Build Arrow libraries with install_name set to @rpath
-- ARROW_GGDB_DEBUG=ON [default=ON]
-- Pass -ggdb flag to debug builds
-- ARROW_WITH_MUSL=OFF [default=OFF]
-- Whether the system libc is musl or not
-- ARROW_ENABLE_THREADING=ON [default=ON]
-- Enable threading in Arrow core
--
-- Test and benchmark options:
--
-- ARROW_BUILD_EXAMPLES=OFF [default=OFF]
-- Build the Arrow examples
-- ARROW_BUILD_TESTS=OFF [default=OFF]
-- Build the Arrow googletest unit tests
-- ARROW_ENABLE_TIMING_TESTS=ON [default=ON]
-- Enable timing-sensitive tests
-- ARROW_BUILD_INTEGRATION=OFF [default=OFF]
-- Build the Arrow integration test executables
-- ARROW_BUILD_BENCHMARKS=OFF [default=OFF]
-- Build the Arrow micro benchmarks
-- ARROW_BUILD_BENCHMARKS_REFERENCE=OFF [default=OFF]
-- Build the Arrow micro reference benchmarks
-- ARROW_BUILD_OPENMP_BENCHMARKS=OFF [default=OFF]
-- Build the Arrow benchmarks that rely on OpenMP
-- ARROW_BUILD_DETAILED_BENCHMARKS=OFF [default=OFF]
-- Build benchmarks that do a longer exploration of performance
-- ARROW_TEST_LINKAGE=static [default=static|shared]
-- Linkage of Arrow libraries with unit tests executables.
-- ARROW_FUZZING=OFF [default=OFF]
-- Build Arrow Fuzzing executables
-- ARROW_LARGE_MEMORY_TESTS=OFF [default=OFF]
-- Enable unit tests which use large memory
--
-- Lint options:
--
-- ARROW_ONLY_LINT=OFF [default=OFF]
-- Only define the lint and check-format targets
-- ARROW_VERBOSE_LINT=OFF [default=OFF]
-- If off, 'quiet' flags will be passed to linting tools
-- ARROW_GENERATE_COVERAGE=OFF [default=OFF]
-- Build with C++ code coverage enabled
--
-- Checks options:
--
-- ARROW_TEST_MEMCHECK=OFF [default=OFF]
-- Run the test suite using valgrind --tool=memcheck
-- ARROW_USE_ASAN=OFF [default=OFF]
-- Enable Address Sanitizer checks
-- ARROW_USE_TSAN=OFF [default=OFF]
-- Enable Thread Sanitizer checks
-- ARROW_USE_UBSAN=OFF [default=OFF]
-- Enable Undefined Behavior sanitizer checks
--
-- Project component options:
--
-- ARROW_ACERO=ON [default=OFF]
-- Build the Arrow Acero Engine Module
-- ARROW_AZURE=OFF [default=OFF]
-- Build Arrow with Azure support (requires the Azure SDK for C++)
-- ARROW_BUILD_UTILITIES=OFF [default=OFF]
-- Build Arrow commandline utilities
-- ARROW_COMPUTE=ON [default=OFF]
-- Build all Arrow Compute kernels
-- ARROW_CSV=ON [default=OFF]
-- Build the Arrow CSV Parser Module
-- ARROW_CUDA=OFF [default=OFF]
-- Build the Arrow CUDA extensions (requires CUDA toolkit)
-- ARROW_DATASET=ON [default=OFF]
-- Build the Arrow Dataset Modules
-- ARROW_FILESYSTEM=ON [default=OFF]
-- Build the Arrow Filesystem Layer
-- ARROW_FLIGHT=OFF [default=OFF]
-- Build the Arrow Flight RPC System (requires GRPC, Protocol Buffers)
-- ARROW_FLIGHT_SQL=OFF [default=OFF]
-- Build the Arrow Flight SQL extension
-- ARROW_GANDIVA=OFF [default=OFF]
-- Build the Gandiva libraries
-- ARROW_GCS=OFF [default=OFF]
-- Build Arrow with GCS support (requires the GCloud SDK for C++)
-- ARROW_HDFS=OFF [default=OFF]
-- Build the Arrow HDFS bridge
-- ARROW_IPC=ON [default=ON]
-- Build the Arrow IPC extensions
-- ARROW_JEMALLOC=OFF [default=ON]
-- Build the Arrow jemalloc-based allocator
-- ARROW_JSON=ON [default=OFF]
-- Build Arrow with JSON support (requires RapidJSON)
-- ARROW_MIMALLOC=ON [default=OFF]
-- Build the Arrow mimalloc-based allocator
-- ARROW_PARQUET=ON [default=OFF]
-- Build the Parquet libraries
-- ARROW_ORC=OFF [default=OFF]
-- Build the Arrow ORC adapter
-- ARROW_PYTHON=OFF [default=OFF]
-- Build some components needed by PyArrow.
-- (This is a deprecated option. Use CMake presets instead.)
-- ARROW_S3=OFF [default=OFF]
-- Build Arrow with S3 support (requires the AWS SDK for C++)
-- ARROW_SKYHOOK=OFF [default=OFF]
-- Build the Skyhook libraries
-- ARROW_SUBSTRAIT=OFF [default=OFF]
-- Build the Arrow Substrait Consumer Module
-- ARROW_TENSORFLOW=OFF [default=OFF]
-- Build Arrow with TensorFlow support enabled
-- ARROW_TESTING=OFF [default=OFF]
-- Build the Arrow testing libraries
--
-- Thirdparty toolchain options:
--
-- ARROW_DEPENDENCY_SOURCE=AUTO [default=AUTO|BUNDLED|SYSTEM|CONDA|VCPKG|BREW]
-- Method to use for acquiring arrow's build dependencies
-- ARROW_VERBOSE_THIRDPARTY_BUILD=OFF [default=OFF]
-- Show output from ExternalProjects rather than just logging to files
-- ARROW_DEPENDENCY_USE_SHARED=ON [default=ON]
-- Link to shared libraries
-- ARROW_BOOST_USE_SHARED=OFF [default=ON]
-- Rely on Boost shared libraries where relevant
-- ARROW_BROTLI_USE_SHARED=ON [default=ON]
-- Rely on Brotli shared libraries where relevant
-- ARROW_BZ2_USE_SHARED=ON [default=ON]
-- Rely on Bz2 shared libraries where relevant
-- ARROW_GFLAGS_USE_SHARED=ON [default=ON]
-- Rely on GFlags shared libraries where relevant
-- ARROW_GRPC_USE_SHARED=ON [default=ON]
-- Rely on gRPC shared libraries where relevant
-- ARROW_JEMALLOC_USE_SHARED=ON [default=ON]
-- Rely on jemalloc shared libraries where relevant
-- ARROW_LLVM_USE_SHARED=ON [default=ON]
-- Rely on LLVM shared libraries where relevant
-- ARROW_LZ4_USE_SHARED=ON [default=ON]
-- Rely on lz4 shared libraries where relevant
-- ARROW_OPENSSL_USE_SHARED=ON [default=ON]
-- Rely on OpenSSL shared libraries where relevant
-- ARROW_PROTOBUF_USE_SHARED=ON [default=ON]
-- Rely on Protocol Buffers shared libraries where relevant
-- ARROW_SNAPPY_USE_SHARED=ON [default=ON]
-- Rely on snappy shared libraries where relevant
-- ARROW_THRIFT_USE_SHARED=ON [default=ON]
-- Rely on thrift shared libraries where relevant
-- ARROW_UTF8PROC_USE_SHARED=ON [default=ON]
-- Rely on utf8proc shared libraries where relevant
-- ARROW_ZSTD_USE_SHARED=ON [default=ON]
-- Rely on zstd shared libraries where relevant
-- ARROW_USE_GLOG=OFF [default=OFF]
-- Build libraries with glog support for pluggable logging
-- ARROW_WITH_BACKTRACE=ON [default=ON]
-- Build with backtrace support
-- ARROW_WITH_OPENTELEMETRY=OFF [default=OFF]
-- Build libraries with OpenTelemetry support for distributed tracing
-- ARROW_WITH_BROTLI=OFF [default=OFF]
-- Build with Brotli compression
-- ARROW_WITH_BZ2=OFF [default=OFF]
-- Build with BZ2 compression
-- ARROW_WITH_LZ4=ON [default=OFF]
-- Build with lz4 compression
-- ARROW_WITH_SNAPPY=ON [default=OFF]
-- Build with Snappy compression
-- ARROW_WITH_ZLIB=OFF [default=OFF]
-- Build with zlib compression
-- ARROW_WITH_ZSTD=OFF [default=OFF]
-- Build with zstd compression
-- ARROW_WITH_UCX=OFF [default=OFF]
-- Build with UCX transport for Arrow Flight
-- (only used if ARROW_FLIGHT is ON)
-- ARROW_WITH_UTF8PROC=ON [default=ON]
-- Build with support for Unicode properties using the utf8proc library
-- (only used if ARROW_COMPUTE is ON or ARROW_GANDIVA is ON)
-- ARROW_WITH_RE2=ON [default=ON]
-- Build with support for regular expressions using the re2 library
-- (only used if ARROW_COMPUTE or ARROW_GANDIVA is ON)
--
-- Parquet options:
--
-- PARQUET_MINIMAL_DEPENDENCY=OFF [default=OFF]
-- Depend only on Thirdparty headers to build libparquet.
-- Always OFF if building binaries
-- PARQUET_BUILD_EXECUTABLES=OFF [default=OFF]
-- Build the Parquet executable CLI tools. Requires static libraries to be built.
-- PARQUET_BUILD_EXAMPLES=OFF [default=OFF]
-- Build the Parquet examples. Requires static libraries to be built.
-- PARQUET_REQUIRE_ENCRYPTION=OFF [default=OFF]
-- Build support for encryption. Fail if OpenSSL is not found
--
-- Gandiva options:
--
-- ARROW_GANDIVA_STATIC_LIBSTDCPP=OFF [default=OFF]
-- Include -static-libstdc++ -static-libgcc when linking with
-- Gandiva static libraries
-- ARROW_GANDIVA_PC_CXX_FLAGS="" [default=""]
-- Compiler flags to append when pre-compiling Gandiva operations
--
-- Advanced developer options:
--
-- ARROW_EXTRA_ERROR_CONTEXT=OFF [default=OFF]
-- Compile with extra error context (line numbers, code)
-- ARROW_OPTIONAL_INSTALL=OFF [default=OFF]
-- If enabled install ONLY targets that have already been built. Please be
-- advised that if this is enabled 'install' will fail silently on components
-- that have not been built
-- ARROW_GDB_INSTALL_DIR="" [default=""]
-- Use a custom install directory for GDB plugin.
-- In general, you don't need to specify this because the default
-- (CMAKE_INSTALL_FULL_BINDIR on Windows, CMAKE_INSTALL_FULL_LIBDIR otherwise)
-- is reasonable.
-- Outputting build configuration summary to /tmp/RtmpbjEemO/file68c5abd6127/cmake_summary.json
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/RtmpbjEemO/file68c5abd6127
+ /usr/bin/cmake --build . --target install -- -j 2
[ 0%] Creating directories for 'snappy_ep'
[ 0%] Creating directories for 'boost_ep'
[ 0%] Performing download step (download, verify and extract) for 'snappy_ep'
[ 0%] Performing download step (download, verify and extract) for 'boost_ep'
-- snappy_ep download command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-download-*.log
[ 0%] No update step for 'snappy_ep'
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[ 0%] Performing configure step for 'snappy_ep'
-- snappy_ep configure command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-configure-*.log
[ 0%] Performing build step for 'snappy_ep'
-- snappy_ep build command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-build-*.log
[ 1%] Performing install step for 'snappy_ep'
-- snappy_ep install command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-install-*.log
[ 2%] Completed 'snappy_ep'
[ 2%] Built target snappy_ep
[ 2%] Creating directories for 'mimalloc_ep'
[ 2%] Performing download step (download, verify and extract) for 'mimalloc_ep'
-- mimalloc_ep download command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/mimalloc_ep-prefix/src/mimalloc_ep-stamp/mimalloc_ep-download-*.log
[ 2%] No update step for 'mimalloc_ep'
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[ 4%] Performing configure step for 'mimalloc_ep'
-- mimalloc_ep configure command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/mimalloc_ep-prefix/src/mimalloc_ep-stamp/mimalloc_ep-configure-*.log
[ 4%] Performing build step for 'mimalloc_ep'
-- mimalloc_ep build command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/mimalloc_ep-prefix/src/mimalloc_ep-stamp/mimalloc_ep-build-*.log
[ 4%] Performing install step for 'mimalloc_ep'
-- mimalloc_ep install command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/mimalloc_ep-prefix/src/mimalloc_ep-stamp/mimalloc_ep-install-*.log
[ 4%] Completed 'mimalloc_ep'
[ 4%] Built target mimalloc_ep
[ 4%] Creating directories for 'rapidjson_ep'
[ 4%] Performing download step (download, verify and extract) for 'rapidjson_ep'
-- rapidjson_ep download command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/src/rapidjson_ep-stamp/rapidjson_ep-download-*.log
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[ 4%] Performing configure step for 'rapidjson_ep'
-- rapidjson_ep configure command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/src/rapidjson_ep-stamp/rapidjson_ep-configure-*.log
[ 4%] Performing build step for 'rapidjson_ep'
-- rapidjson_ep build command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/src/rapidjson_ep-stamp/rapidjson_ep-build-*.log
[ 5%] Performing install step for 'rapidjson_ep'
-- rapidjson_ep install command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/src/rapidjson_ep-stamp/rapidjson_ep-install-*.log
[ 6%] Completed 'rapidjson_ep'
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[ 6%] Performing download step (download, verify and extract) for 'xsimd_ep'
-- xsimd_ep download command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/src/xsimd_ep-stamp/xsimd_ep-download-*.log
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-- xsimd_ep configure command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/src/xsimd_ep-stamp/xsimd_ep-configure-*.log
[ 7%] Performing build step for 'xsimd_ep'
-- xsimd_ep build command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/src/xsimd_ep-stamp/xsimd_ep-build-*.log
[ 8%] Performing install step for 'xsimd_ep'
-- xsimd_ep install command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/src/xsimd_ep-stamp/xsimd_ep-install-*.log
[ 9%] Completed 'xsimd_ep'
[ 9%] Built target xsimd_ep
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[ 9%] Performing download step (download, verify and extract) for 'lz4_ep'
-- lz4_ep download command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/lz4_ep-prefix/src/lz4_ep-stamp/lz4_ep-download-*.log
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[ 11%] Performing configure step for 'lz4_ep'
-- lz4_ep configure command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/lz4_ep-prefix/src/lz4_ep-stamp/lz4_ep-configure-*.log
[ 11%] Performing build step for 'lz4_ep'
-- lz4_ep build command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/lz4_ep-prefix/src/lz4_ep-stamp/lz4_ep-build-*.log
[ 11%] Performing install step for 'lz4_ep'
-- lz4_ep install command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/lz4_ep-prefix/src/lz4_ep-stamp/lz4_ep-install-*.log
[ 11%] Completed 'lz4_ep'
[ 11%] Built target lz4_ep
[ 11%] Creating directories for 're2_ep'
[ 11%] Performing download step (download, verify and extract) for 're2_ep'
-- re2_ep download command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/re2_ep-prefix/src/re2_ep-stamp/re2_ep-download-*.log
[ 11%] No update step for 're2_ep'
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[ 11%] Performing configure step for 're2_ep'
-- re2_ep configure command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/re2_ep-prefix/src/re2_ep-stamp/re2_ep-configure-*.log
[ 11%] Performing build step for 're2_ep'
-- re2_ep build command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/re2_ep-prefix/src/re2_ep-stamp/re2_ep-build-*.log
[ 12%] Performing install step for 're2_ep'
-- re2_ep install command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/re2_ep-prefix/src/re2_ep-stamp/re2_ep-install-*.log
[ 13%] Completed 're2_ep'
[ 13%] Built target re2_ep
[ 13%] Creating directories for 'utf8proc_ep'
[ 13%] Performing download step (download, verify and extract) for 'utf8proc_ep'
-- utf8proc_ep download command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-download-*.log
[ 13%] No update step for 'utf8proc_ep'
[ 13%] No patch step for 'utf8proc_ep'
[ 13%] Performing configure step for 'utf8proc_ep'
-- utf8proc_ep configure command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-configure-*.log
[ 13%] Performing build step for 'utf8proc_ep'
-- utf8proc_ep build command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-build-*.log
[ 14%] Performing install step for 'utf8proc_ep'
-- utf8proc_ep install command succeeded. See also /tmp/RtmpbjEemO/file68c5abd6127/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-install-*.log
[ 15%] Completed 'utf8proc_ep'
[ 15%] Built target utf8proc_ep
CMake Error at boost_ep-stamp/boost_ep-download-RELEASE.cmake:37 (message):
Command failed: 1
'/usr/bin/cmake' '-Dmake=' '-Dconfig=' '-P' '/tmp/RtmpbjEemO/file68c5abd6127/boost_ep-prefix/src/boost_ep-stamp/boost_ep-download-RELEASE-impl.cmake'
See also
/tmp/RtmpbjEemO/file68c5abd6127/boost_ep-prefix/src/boost_ep-stamp/boost_ep-download-*.log
-- stdout output is:
...skipping to end...
1_81_0.tar.gz'
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-- verifying file...
file='/tmp/RtmpbjEemO/file68c5abd6127/boost_ep-prefix/src/boost_1_81_0.tar.gz'
-- SHA256 hash of
/tmp/RtmpbjEemO/file68c5abd6127/boost_ep-prefix/src/boost_1_81_0.tar.gz
does not match expected value
expected: '9e0ffae35528c35f90468997bc8d99500bf179cbae355415a89a600c38e13574'
actual: '205666dea9f6a7cfed87c7a6dfbeb52a2c1b9de55712c9c1a87735d7181452b6'
-- Hash mismatch, removing...
-- Using src='https://apache.jfrog.io/artifactory/arrow/thirdparty/7.0.0/boost_1_81_0.tar.gz'
-- [download 100% complete]
-- verifying file...
file='/tmp/RtmpbjEemO/file68c5abd6127/boost_ep-prefix/src/boost_1_81_0.tar.gz'
-- SHA256 hash of
/tmp/RtmpbjEemO/file68c5abd6127/boost_ep-prefix/src/boost_1_81_0.tar.gz
does not match expected value
expected: '9e0ffae35528c35f90468997bc8d99500bf179cbae355415a89a600c38e13574'
actual: 'f799db17e37a963a08674fe3a565b4acb07681de084d26eb14c305d654caef66'
-- Hash mismatch, removing...
-- Using src='https://boostorg.jfrog.io/artifactory/main/release/1.81.0/source/boost_1_81_0.tar.gz'
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-- verifying file...
file='/tmp/RtmpbjEemO/file68c5abd6127/boost_ep-prefix/src/boost_1_81_0.tar.gz'
-- SHA256 hash of
/tmp/RtmpbjEemO/file68c5abd6127/boost_ep-prefix/src/boost_1_81_0.tar.gz
does not match expected value
expected: '9e0ffae35528c35f90468997bc8d99500bf179cbae355415a89a600c38e13574'
actual: '205666dea9f6a7cfed87c7a6dfbeb52a2c1b9de55712c9c1a87735d7181452b6'
-- Hash mismatch, removing...
-- Using src='https://sourceforge.net/projects/boost/files/boost/1.81.0/boost_1_81_0.tar.gz'
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-- verifying file...
file='/tmp/RtmpbjEemO/file68c5abd6127/boost_ep-prefix/src/boost_1_81_0.tar.gz'
-- SHA256 hash of
/tmp/RtmpbjEemO/file68c5abd6127/boost_ep-prefix/src/boost_1_81_0.tar.gz
does not match expected value
expected: '9e0ffae35528c35f90468997bc8d99500bf179cbae355415a89a600c38e13574'
actual: '205666dea9f6a7cfed87c7a6dfbeb52a2c1b9de55712c9c1a87735d7181452b6'
-- Hash mismatch, removing...
-- stderr output is:
CMake Error at boost_ep-stamp/download-boost_ep.cmake:170 (message):
Each download failed!
CMake Error at boost_ep-stamp/boost_ep-download-RELEASE-impl.cmake:9 (message):
Command failed (1):
'/usr/bin/cmake' '-P' '/tmp/RtmpbjEemO/file68c5abd6127/boost_ep-prefix/src/boost_ep-stamp/download-boost_ep.cmake'
CMake Error at boost_ep-stamp/boost_ep-download-RELEASE.cmake:47 (message):
Stopping after outputting logs.
make[2]: *** [CMakeFiles/boost_ep.dir/build.make:99: boost_ep-prefix/src/boost_ep-stamp/boost_ep-download] Error 1
make[1]: *** [CMakeFiles/Makefile2:848: CMakeFiles/boost_ep.dir/all] Error 2
make: *** [Makefile:146: all] Error 2
**** Complete build log may still be present at /tmp/RtmpbjEemO/file68c32e1b48b.log
*** Failed to find Arrow C++ libraries.
------------------------- NOTE ---------------------------
There was an issue preparing the Arrow C++ libraries.
See https://arrow.apache.org/docs/r/articles/install.html
----------------------------------------------------------
Test compile error: <stdin>:1:10: fatal error: arrow/api.h: No such file or directory
compilation terminated.
Failing compile command: g++ -E -I/usr/local/include -D__MUSL__ -std=gnu++17 -xc++ -
PKG_CFLAGS=
PKG_LIBS=
ERROR: configuration failed for package ‘arrow’
* removing ‘/usr/local/lib/R/library/arrow’
The downloaded source packages are in
‘/tmp/RtmpaobHHB/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
Warning message:
In install.packages("arrow") :
installation of package ‘arrow’ had non-zero exit status
Get a different error on 3.18 and also 3.19:
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-- Using src='https://apache.jfrog.io/artifactory/arrow/thirdparty/7.0.0/boost_1_81_0.tar.gz'
-- [download 100% complete]
-- verifying file...
file='/tmp/RtmpKdGkAc/file9235903ab8/boost_ep-prefix/src/boost_1_81_0.tar.gz'
-- SHA256 hash of
/tmp/RtmpKdGkAc/file9235903ab8/boost_ep-prefix/src/boost_1_81_0.tar.gz
does not match expected value
expected: '9e0ffae35528c35f90468997bc8d99500bf179cbae355415a89a600c38e13574'
actual: 'f799db17e37a963a08674fe3a565b4acb07681de084d26eb14c305d654caef66'
-- Hash mismatch, removing...
-- stderr output is:
...skipping to end...
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transfer closed with 29792667 bytes remaining to read
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--- LOG END ---
CMake Error at boost_ep-stamp/boost_ep-download-RELEASE-impl.cmake:9 (message):
Command failed (1):
'/usr/bin/cmake' '-P' '/tmp/RtmpKdGkAc/file9235903ab8/boost_ep-prefix/src/boost_ep-stamp/download-boost_ep.cmake'
CMake Error at boost_ep-stamp/boost_ep-download-RELEASE.cmake:47 (message):
Stopping after outputting logs.
make[2]: *** [CMakeFiles/boost_ep.dir/build.make:99: boost_ep-prefix/src/boost_ep-stamp/boost_ep-download] Error 1
make[1]: *** [CMakeFiles/Makefile2:848: CMakeFiles/boost_ep.dir/all] Error 2
gmake: *** [Makefile:146: all] Error 2
**** Complete build log may still be present at /tmp/RtmpKdGkAc/file9234f085270.log
*** Failed to find Arrow C++ libraries.
------------------------- NOTE ---------------------------
There was an issue preparing the Arrow C++ libraries.
See https://arrow.apache.org/docs/r/articles/install.html
----------------------------------------------------------
Test compile error: <stdin>:1:10: fatal error: arrow/api.h: No such file or directory
compilation terminated.
Failing compile command: g++ -E -O2 -fstack-clash-protection -Wformat -Werror=format-security -D_GLIBCXX_ASSERTIONS=1 -D_LIBCPP_ENABLE_THREAD_SAFETY_ANNOTATIONS=1 -D_LIBCPP_ENABLE_HARDENED_MODE=1 -D__MUSL__ -flto -std=gnu++17 -xc++ -
PKG_CFLAGS=
PKG_LIBS=
ERROR: configuration failed for package ‘arrow’
* removing ‘/usr/lib/R/library/arrow’
Seems like this is https://github.com/apache/arrow/issues/40756, so we wait for that to be fixed.
I'm experiencing this issue as well, what draws my attention is:
In file included from /tmp/RtmpjolAlp/filec20f4d295664/re2_ep-prefix/src/re2_ep/util/pcre.cc:21:
/tmp/RtmpjolAlp/filec20f4d295664/re2_ep-prefix/src/re2_ep/util/pcre.h:503:11: error: 'int32_t' does not name a type
503 | mutable int32_t hit_limit_; // Hit limit during execution (bool)
Maybe is solvable by setting some compiler flags? I tried
CFLAGS_CXX+=-std=c++0x but without any luck so far..
arrow used to build, so you can also try an older version of the R package.
But not with the installr tool I guess? I would need to use devtools::install_version() probably?
installr supports everything that pak supports: https://pak.r-lib.org/reference/pak_package_sources.html
So it is like this:
installr ... [email protected]
Cool, so 14.0.2.1 did compile? I'll add a note to the README and the example as well.
It did, like this:
RUN installr -d \
-t "make openssl-dev cmake linux-headers apache-arrow-dev" \
-a "openssl libarrow" [email protected]
EDIT: added libarrow as permanent Linux library in order to function well
In our case, we needed libarrow_dataset and sodium as well, so it's now:
RUN installr -d \
-t "make openssl-dev cmake linux-headers apache-arrow-dev libsodium-dev" \
-a "openssl libarrow libarrow_dataset libsodium" sodium [email protected]
I had the same issue with PyArrow (16.1.0), once python:v*..-alpine was using Alpine v3.20, the problem was solved since the libarrow and apache-arrow-dev libraries were compatible. (Alpine Linux 3.19 provides Arrow 14 or 15, not 16).
Alpine Linux v3.19 is using: https://dl-cdn.alpinelinux.org/alpine/v3.19/main/x86_64/APKINDEX.tar.gz https://dl-cdn.alpinelinux.org/alpine/v3.19/community/x86_64/APKINDEX.tar.gz
which provides: apache-arrow (14.0.1-r3) libarrow (14.0.1-r3)
and such.
While Alpine Linux 3.20 is using: https://dl-cdn.alpinelinux.org/alpine/v3.20/main/x86_64/APKINDEX.tar.gz https://dl-cdn.alpinelinux.org/alpine/v3.20/community/x86_64/APKINDEX.tar.gz
which provides: apache-arrow (16.1.0-r0) libarrow (16.1.0-r0)
Hence you have to pin the R arrow package to v14.0.2.1 so it can use the Alpine v3.19 provided libraries.
Better solution would be to bump the R-minimal images to use Alpine v3.20
@pascalgulikers Yes, that's exactly what we are doing in the example: https://github.com/r-hub/r-minimal/blob/57ef10775ed62acdbf4cfdfe62860896c919a585/examples/arrow/Dockerfile#L12
Yes, I'm aware. But if Alpine would be v3.20, you could just do:
-a "openssl libarrow_dataset libarrow" arrow
I know. But that could possibly cause trouble for other packages. In general I don't always update to every new Alpine release, to avoid unnecessary maintenance work.