qmarcou

Results 57 comments of qmarcou

Hi Thomas, Sorry about this I should have spotted it looking more than 2 seconds at the code! Thanks for the PR i'll accept it now! Keep me updated of...

Hi Thomas, Not sure my answer is still relevant but I find this weird that increasing D deletion range would change anything in this segfault thing... I or @alfaceor still...

Hi @zacmontague , Thank your for submitting a bug report. It's the second time this error is reported and I was not able to diagnose the exact reason the first...

Great to hear that changing your compiler did "solve" your problem! I had a quick look at the new logs, I'm still not sure why this compilation fails with GCC...

Hi @decenwang The non coding sequences are defined as sequences that are known not to code for a viable receptor containing either a frame shift or a stop codon within...

Hi @zacmontague , > What exactly do you mean in the last sentence? It's unclear. Do you mean, perhaps, that the commands I've written below would allow for model_parms.txt and...

Hi Anna, Below are the answers to your questions, hopefully well structured, please tell me if this is unclear: ___ # IGoR's handling of allelic variants. ## Origin of IGoR's...

Hi Jeremy, Sorry for the late reply. These are two interesting questions, see my answers below: 1. From what we have observed only gene usage and/or alleles sequences vary among...

Mmm that is odd, as explained in [here](https://github.com/qmarcou/IGoR#inference-and-evaluation-commands) setting it to 0.0 should explore all possible scenarios (yielding a very slow execution time) at first thought I don't see why...

Hello @kgrigaityte , For now IGoR is loading all alignments in memory and store them there, I guess this strategy problematic upon running over large alignment files. You should have...