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redbiom metadata searches are very slow

Open wasade opened this issue 6 years ago • 1 comments
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Searching for "antibiotics" takes minutes to longer. The same search from the command line (´redbiom search metadata antibiotics´) takes roughly 10s.

wasade avatar Feb 26 '19 18:02 wasade

Proposed solution by @wasade:

  • cache samples in each context (do independent of web users server side)
  • search for samples with metadata
  • for each context, get set intersection of samples with what's cached

antgonza avatar Feb 26 '19 19:02 antgonza