Contrast that is not included in design throws error

[WackerO]

Description of the bug

When running rnadeseq with a contrast list that contains a factor not described in the design file, the following error is thrown:

Error in cleanContrast(object, contrast, expanded = isExpanded, listValues = listValues, : as 16H is the reference level, was expecting condition_time_1H_vs_16H to be present in 'resultsNames(object)'

This example error resulted from the test dataset with the design and contrast list attached to this issue. I should add a check that controls for all the contrast options, not just list, if the respective contrasts are also provided as design elements, and if not, throws a clearer error to explain to users what is the problem

Command used and terminal output

No response

Relevant files

design.txt contrast_list.csv

System information

No response