c3d

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Failed to build on Ubuntu 20.04

1

c3d from the itk5 branch failed to build Here is the biuld log: [Biuld.log](https://github.com/pyushkevich/c3d/files/9447427/Biuld.log) Here is cmake cache.[CMakeCache.txt](https://github.com/pyushkevich/c3d/files/9447430/CMakeCache.txt) I am compiling on Ubuntu 20.04. I am using ITK 5.2.1. If...

MRIDude

-rms doesn't compute RMS

2

``` % c3d -help rms -rms : Voxelwise vector norm Syntax: `-rms` Computes RMS (root mean square) of all images on the stack. The command takes the square of each...

cookpa

Provide conda-forge package

16

What's the statuts of (and work remaining for) porting Convert3D to ITK version 5? I can see some initial work on the `itk5` branch and a pending PR #8. I'd...

ghisvail

fail to build c3d with the master branch

1

step to build: ```bash git clone https://github.com/pyushkevich/c3d.git cd c3d cmake -B build -DBUILD_GUI=ON -DBUILD_TESTING=OFF -DCMAKE_CXX_FLAGS="-I/usr/include/eigen3" . cd build make ``` the commit I used is f7e9d5ce4837025665c184659c3f857b6cf3a130 gcc: 11.2.0 itk: 5.2.1...

hubutui

It was computing an offset of 0.5 mm instead of 0.5 * (input spacing). Before: ``` c3d -create 25x25x16 0.1x0.1x0.1mm -o 100microns.nii.gz c3d -verbose 100microns.nii.gz -resample-mm 0.01x0.01x0.01mm -o 10microns.nii.gz Reading...

cookpa

ENH: Additional fixes for wrap filter

2

Update the origin of the output image, and the documentation for this filter.

cookpa

One of the size vector processing method, ReadRealVector, raising errors incorrectly for 4d size-vector, which causes some c4d command not working. example: c4d -verbose img4d.nii.gz -resample-mm 2x2x2x2mm -o out.nii.gz

jilei-hao

Itk5

1

This adds an optional parameter to -comp (connected components) to switch "fully connected" on and off. It is still possible to omit the parameter in order to stay compatible with...

crossmanith

-resample-iso raises the exception Unknown command

1

Hi, I was trying resampling options, it seems that c3d -resample-iso always raises the following exception: Unknown command -resample-iso Unknown exception caught by convert3d When processing command: -resample-iso Just wanted...

MehdiShekarnabi

Building C3D on Ubuntu 20.04

3

I am trying to build C3D on Ubuntu 20.04 and I am using latest ITK version for it. But once I configure the build and try to `make -j5` I...

cepa995