Candidates to be integrated into the semantic-python-overview list

[cknoll]

This issue serves as place to note candidate projects (via url), which might be added to the list.

Update (2022-01-29): I initially planned to use this issue as a public place to note down candidates to add them by later myself. Now, I try to ping people involved in those projects. Benefits:

• Information added is more accurate
• People get to know of this list
• Saves time for me

Update: (2022-02-04): The recent activity in this repository (forks and pull requests seem to had effects on githubs recommendation algorithm: the number of stars rose from ≈25 to ≈250 in about 48h and keeps rising). This is exactly the the intention of this repo and https://pysemtec.org in general: to generate attention and publicity for python-based semantic-technology tools.

[cknoll]

https://github.com/oeg-dataintegration/owl2rml

[cknoll]

• [ ] https://github.com/tgbugs/pyontutils should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe the maintainer @tgbugs could open a PR.

[cknoll]

• [x] https://github.com/OnToology/OnToology should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the recent contributors (@mariapoveda @dgarijo @ahmad88me) could open a PR.

[cknoll]

• [ ] https://github.com/usc-isi-i2/ontology-visualization should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, the maintainer @fatestigma could open a PR.

[cknoll]

• [x] https://github.com/dhimmel/obonet should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the contributors (@dhimmel @arvkevi @cmungall @torstees @cthoyt) could open a PR.

[dgarijo]

@cknoll I am happy to have OnToology as part of the list. Please feel free to integrate it if you want. We already added some of these tools in https://github.com/semantalytics/awesome-semantic-web

[cknoll]

@dgarijo done, see https://github.com/pysemtec/semantic-python-overview/commit/c4883391a4499e614b79a31f8635c72fec908297. Feel free to improve the entry or add other projects.

[dgarijo]

Thanks!

[dhimmel]

https://github.com/dhimmel/obonet should be integrated

Opened https://github.com/pysemtec/semantic-python-overview/pull/10 to add obonet and nxontology, which is a more general purpose successor I've been working on.

[cthoyt]

Pinging @althonos who probably will have somthing to add (e.g., pronto)

[dhimmel]

will have somthing to add (e.g., pronto)

Pronto already added by https://github.com/pysemtec/semantic-python-overview/commit/33b5a7a10b84969a4df440902c4c6ad2e6b13c6c

[cknoll]

• [ ] https://github.com/AKSW/owlapy should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the contributors (@SimonBin @LukasBluebaum @Demirrr) could open a PR.

Update: link to docs: https://owlapy-docs.netlify.app/, see https://github.com/AKSW/owlapy/issues/5#issuecomment-1064159527

[cknoll]

• [x] https://github.com/paulhoule/gastrodon should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the contributors (@paulhoule @jhadjar) could open a PR.

[cknoll]

• [x] https://github.com/DerwenAI/kglab should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the contributors (e.g. @ceteri @louisguitton @Ankush-Chander @Mec-iS @tomaarsen) could open a PR.

[cknoll]

• [ ] https://github.com/franzinc/agraph-python and maybe https://github.com/franzinc/agraph-examples should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the contributors (e.g. @dklayer @KenCheetham) could open a PR.

The reasoning docs seem especially interesting: https://franz.com/agraph/support/documentation/current/python/tutorial/example020.html.

[ceteri]

Thank you @cknoll, I've just added a PR for kglab

You may also want to check the list we've been curating of "Similar Projects": https://derwen.ai/docs/kgl/ack/#similar-projects

Also, we'll make links back into https://github.com/pysemtec/semantic-python-overview

[cknoll]

• [ ] https://github.com/libris/definitions should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the contributors (e.g. @niklasl @klngwll @sarwik @oBlissing @olovy) could open a PR.

[cknoll]

• [ ] https://github.com/ozekik/lightrdf should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, the maintainer @ozekik could open a PR.

[WolfgangFahl]

Carsten - thanks for getting in touch and letting me know about the list: https://github.com/WolfgangFahl/pyLoDStorage is a candidate - it is a library that allows to works with python native list of dicts in a tabular way and interchange data this way between JSON, Relational Data and SPARQL. There is also a Query and Querymanager concept which allows to specify named queries. The tabulate library is intergrated so that results can be immediately shown not only as JSON, CSV, TSV and XML (which are natively supported by the SPARQL protocol) but also as e.g. latex, mediawiki or github markup.

The current list of default queries is shown below

sparqlquery --list
Predicate usage:Predicate usage
Predicate usage grouped by source:Predicate usage grouped by source
Conference Series:Scientific conference series
US President Nicknames:Nick names of US Presidents
cities:German cities by population
FirstTriple:First Triple

The result of e.g.

sparqlquery -qn "US President Nicknames" -f github

can be cut& paste directly here (see below). I have cheated a bit by improving the "try it!" result - currently the full query is not shown automatically yet - i had to actually enter it in the query service and then paste the url below.

Nick names of US Presidents

https://stackoverflow.com/questions/70206791/sparql-i-have-individual-with-multiple-values-for-single-object-property-how

query

SELECT ?president ?presidentLabel (GROUP_CONCAT(DISTINCT ?nickName; SEPARATOR=",") as ?nickNames)
WHERE 
{
  # president
  ?president wdt:P39 wd:Q11696.
  # nickname
  ?president wdt:P1449 ?nickName
  SERVICE wikibase:label { bd:serviceParam wikibase:language "en". }
} GROUP BY ?president ?presidentLabel

try it!

result

president	presidentLabel	nickNames
Q23	George Washington	American Fabius
Q76	Barack Obama	Barry
Q1124	Bill Clinton	The Comeback Kid,Slick Willie
Q6279	Joe Biden	Joe
Q9588	Richard Nixon	Dick Nixon
Q9696	John F. Kennedy	Jack
Q9916	Dwight D. Eisenhower	Ike
Q11817	Andrew Jackson	Old Hickory
Q11820	Martin Van Buren	Old Kinderhook
Q11869	William Henry Harrison	Old Tippecanoe
Q11896	Zachary Taylor	Old Rough and Ready
Q22686	Donald Trump	The Donald
Q33866	Theodore Roosevelt	Teddy
Q34836	Ulysses S Grant	“Unconditional Surrender” Grant

[situx]

Hi!

Thanks for curating this list. I maintain a QGIS plugin (https://github.com/sparqlunicorn/sparqlunicornGoesGIS) that allows to query (Geo)SPARQL endpoints to add vector layers in the QGIS software. Like most QGIS plugins it is also written in python and builds on top of RDFlib and pySHACL (https://github.com/RDFLib/pySHACL)

If that is of interest to your list I could issue a pull request with a short description.

[cknoll]

@situx

If that is of interest to your list I could issue a pull request with a short description.

This would be great!

[cknoll]

• [ ] https://github.com/vemonet/rdflib-endpoint should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, the maintainer @vemonet could open a PR?

[cknoll]

• [ ] https://github.com/dahlia/wikidata should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, the maintainer @dahlia could open a PR?

[WolfgangFahl]

https://hongminhee.org/ doesn't mention the project in his own list ... strange

[cknoll]

• [ ] https://github.com/samuelmeuli/python-wikibase and https://github.com/samuelmeuli/wikibase-api should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, the maintainer @samuelmeuli could open a PR?

[cknoll]

• [ ] https://github.com/MNoorFawi/pytholog should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, the maintainer @MNoorFawi could open a PR?

[Murplugg]

Perhaps OWL2Vec*: embedding of OWL ontologies should be integrated.

Repo: https://github.com/KRR-Oxford/OWL2Vec-Star Paper: https://openaccess.city.ac.uk/id/eprint/25129/8/Chen2021_Article_OWL2VecEmbeddingOfOWLOntologie.pdf

[cknoll]

Good idea @Murplugg:

• [ ] https://github.com/KRR-Oxford/OWL2Vec-Star should be integrated into the list https://github.com/pysemtec/semantic-python-overview. Maybe, one of the maintainers @ChenJiaoyan @ernestojimenezruiz could open a PR?

Reason: Maintainers can usually provide the best description of their project and usually are interested in increased visibility.

[cknoll]

• [ ] evaluate https://github.com/semanticpy and the repos there