timeout when executing notebook

[hareball90]

stochastic.ipynb error log

Traceback (most recent call last): File "C:\Users\Hannah.Williams.conda\envs\sphinx-doc\lib\site-packages\nbclient\client.py", line 776, in async_poll_for_reply msg = await ensure_async(self.kc.shell_channel.get_msg(timeout=new_timeout)) File "C:\Users\Hannah.Williams.conda\envs\sphinx-doc\lib\site-packages\jupyter_core\utils_init.py", line 184, in ensure_async result = await obj File "C:\Users\Hannah.Williams.conda\envs\sphinx-doc\lib\site-packages\jupyter_client\channels.py", line 230, in get_msg raise Empty _queue.Empty

During handling of the above exception, another exception occurred:

Traceback (most recent call last): File "C:\Users\Hannah.Williams.conda\envs\sphinx-doc\lib\site-packages\jupyter_cache\executors\utils.py", line 58, in single_nb_execution executenb( File "C:\Users\Hannah.Williams.conda\envs\sphinx-doc\lib\site-packages\nbclient\client.py", line 1265, in execute return NotebookClient(nb=nb, resources=resources, km=km, **kwargs).execute() File "C:\Users\Hannah.Williams.conda\envs\sphinx-doc\lib\site-packages\jupyter_core\utils_init_.py", line 168, in wrapped return loop.run_until_complete(inner) File "C:\Users\Hannah.Williams.conda\envs\sphinx-doc\lib\asyncio\base_events.py", line 647, in run_until_complete return future.result() File "C:\Users\Hannah.Williams.conda\envs\sphinx-doc\lib\site-packages\nbclient\client.py", line 703, in async_execute await self.async_execute_cell( File "C:\Users\Hannah.Williams.conda\envs\sphinx-doc\lib\site-packages\nbclient\client.py", line 1002, in async_execute_cell exec_reply = await self.task_poll_for_reply File "C:\Users\Hannah.Williams.conda\envs\sphinx-doc\lib\site-packages\nbclient\client.py", line 800, in _async_poll_for_reply error_on_timeout_execute_reply = await self._async_handle_timeout(timeout, cell) File "C:\Users\Hannah.Williams.conda\envs\sphinx-doc\lib\site-packages\nbclient\client.py", line 852, in _async_handle_timeout raise CellTimeoutError.error_from_timeout_and_cell( nbclient.exceptions.CellTimeoutError: A cell timed out while it was being executed, after 30 seconds. The message was: Cell execution timed out. Here is a preview of the cell contents:

['x0 = [2362206.0, 3.0, 0.0]', '', "stateList = ['S', 'I', 'R']", '', "paramList = ['beta', 'gamma', 'N']"] ... [' axarr[0].plot(t[:9], solution[:,0])', ' axarr[1].plot(t[:9], solution[:,1]) ', ' axarr[2].plot(t[:9], solution[:,2])', '', 'plt.show()']

[hareball90]

try solution here https://github.com/executablebooks/jupyter-book/issues/948#issuecomment-686953893

[twomagpi]

fixed with the #114 release.