Pat Schloss

Set assertions in/write assertions to human readable file?

1

I am wondering whether you all had previously considered reading in assert/verify statements from a file. In my explorations of TDD with data analysis, I came across the nifty [`tdda`](https://tdda.readthedocs.io/en/latest/)...

gm_create_draft and gm_send_message hang

2

Hi, I've gotten `gmailr` to work for me in the past, but am running into a problem now where it hangs when I try to send the emails. I'm creating...

Unable to find Snakefile

1

I keep getting an error message that says, "`Error: Snakefile "Snakefile" not found.`" My Snakefile is in `workflow/` and I have an `environment.yml` file in `workflow/envs/`. `workflow/` is in the...

When running one of the vignette `run_ml` pipelines we get the following output... ``` > run_ml(otu_small, "rf", + outcome_colname = "dx", + find_feature_importance = TRUE + ) Using 'dx' as...

arb-bio does not exist error

1

When I try to install `arb-bio` and `arb-bio-tools` (individually or together) with conda or mamba, I get the following... ``` v138_2 $ mamba install bioconda::arb-bio Looking for: ['bioconda::arb-bio'] conda-forge/osx-arm64 Using...

Unable to load dependency for roxygenize

9

**Before filing a bug** - [x] I have installed the latest dev version of {precommit} with `remotes::install_github('lorenzwalthert/precommit')` - [x] I have installed the latest hook revisions (update with `precommit::autoupdate()`) -...